Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120806.seq
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    30   3.1  
BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p pro...    28   9.6  
AF181630-1|AAD55416.1| 1228|Drosophila melanogaster BcDNA.GH0492...    28   9.6  
AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster CG30116-P...    28   9.6  
AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster CG30116-P...    28   9.6  
AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster CG30116-P...    28   9.6  
AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster CG30116-P...    28   9.6  

>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 89   ILSSRKMRIKEKEQGS-ASRMRMKIMKKVNPRAKKRKCRIMPKAKLHRPRRMPRNEQPP 262
            I S ++ R + + Q S AS +  K  KK   ++KK K   +PKA   +P   P + QPP
Sbjct: 7881 ITSKKRNRSRSRSQQSQASNIDEKHQKK---KSKKPK-NTVPKAPAQQPTEAPEDVQPP 7935


>BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p protein.
          Length = 1923

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 373  LPH*VVITSWVVAPSPAQFRYNYT*NGDGTTSPKWV--SRRLFISWHSSWAMQLCLWHYS 200
            +P  V +T W+ AP P+Q R   T +G G     W+  S++  I   SS  +Q   WH  
Sbjct: 871  VPLLVPLTGWLPAPLPSQIR-TMTVSGTGCIRAVWLAPSKQHLILATSSGDVQ--QWHIM 927

Query: 199  TFSL 188
            + SL
Sbjct: 928  SNSL 931


>AF181630-1|AAD55416.1| 1228|Drosophila melanogaster BcDNA.GH04922
           protein.
          Length = 1228

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 373 LPH*VVITSWVVAPSPAQFRYNYT*NGDGTTSPKWV--SRRLFISWHSSWAMQLCLWHYS 200
           +P  V +T W+ AP P+Q R   T +G G     W+  S++  I   SS  +Q   WH  
Sbjct: 401 VPLLVPLTGWLPAPLPSQIR-TMTVSGTGCIRAVWLAPSKQHLILATSSGDVQ--QWHIM 457

Query: 199 TFSL 188
           + SL
Sbjct: 458 SNSL 461


>AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster CG30116-PA,
            isoform A protein.
          Length = 1922

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 373  LPH*VVITSWVVAPSPAQFRYNYT*NGDGTTSPKWV--SRRLFISWHSSWAMQLCLWHYS 200
            +P  V +T W+ AP P+Q R   T +G G     W+  S++  I   SS  +Q   WH  
Sbjct: 871  VPLLVPLTGWLPAPLPSQIR-TMTVSGTGCIRAVWLAPSKQHLILATSSGDVQ--QWHIM 927

Query: 199  TFSL 188
            + SL
Sbjct: 928  SNSL 931


>AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster CG30116-PD,
            isoform D protein.
          Length = 1701

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 373  LPH*VVITSWVVAPSPAQFRYNYT*NGDGTTSPKWV--SRRLFISWHSSWAMQLCLWHYS 200
            +P  V +T W+ AP P+Q R   T +G G     W+  S++  I   SS  +Q   WH  
Sbjct: 871  VPLLVPLTGWLPAPLPSQIR-TMTVSGTGCIRAVWLAPSKQHLILATSSGDVQ--QWHIM 927

Query: 199  TFSL 188
            + SL
Sbjct: 928  SNSL 931


>AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster CG30116-PC,
            isoform C protein.
          Length = 1698

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 373  LPH*VVITSWVVAPSPAQFRYNYT*NGDGTTSPKWV--SRRLFISWHSSWAMQLCLWHYS 200
            +P  V +T W+ AP P+Q R   T +G G     W+  S++  I   SS  +Q   WH  
Sbjct: 871  VPLLVPLTGWLPAPLPSQIR-TMTVSGTGCIRAVWLAPSKQHLILATSSGDVQ--QWHIM 927

Query: 199  TFSL 188
            + SL
Sbjct: 928  SNSL 931


>AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster CG30116-PB,
            isoform B protein.
          Length = 1698

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -2

Query: 373  LPH*VVITSWVVAPSPAQFRYNYT*NGDGTTSPKWV--SRRLFISWHSSWAMQLCLWHYS 200
            +P  V +T W+ AP P+Q R   T +G G     W+  S++  I   SS  +Q   WH  
Sbjct: 871  VPLLVPLTGWLPAPLPSQIR-TMTVSGTGCIRAVWLAPSKQHLILATSSGDVQ--QWHIM 927

Query: 199  TFSL 188
            + SL
Sbjct: 928  SNSL 931


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,510,049
Number of Sequences: 53049
Number of extensions: 398759
Number of successful extensions: 1335
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)