Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120804.seq
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.9  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   3.9  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   3.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   6.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   6.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   6.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   6.8  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   6.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 500 LSTSNRNMPXSSN 462
           LSTSN N P S+N
Sbjct: 326 LSTSNSNSPSSTN 338


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 500 LSTSNRNMPXSSN 462
           LSTSN N P S+N
Sbjct: 115 LSTSNSNSPSSTN 127


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 500 LSTSNRNMPXSSN 462
           LSTSN N P S+N
Sbjct: 115 LSTSNSNSPSSTN 127


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 278 GSNKVGTNSIFLGTVYD 328
           G+N++GT  IFL   +D
Sbjct: 492 GNNRMGTCRIFLAPQFD 508


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -2

Query: 337 NSIVVYGAQKNAVSAHFV------GALFDYVVYSSGFSAIYIW 227
           N++ ++G    A +AH++        LF   +  SG  A+ +W
Sbjct: 184 NNVTIFGESAGAAAAHYLILSPMARGLFHKAILQSG-CALNLW 225


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -2

Query: 337 NSIVVYGAQKNAVSAHFV------GALFDYVVYSSGFSAIYIW 227
           N++ ++G    A +AH++        LF   +  SG  A+ +W
Sbjct: 184 NNVTIFGESAGAAAAHYLILSPMARGLFHKAILQSG-CALNLW 225


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -2

Query: 337 NSIVVYGAQKNAVSAHFV------GALFDYVVYSSGFSAIYIW 227
           N++ ++G    A +AH++        LF   +  SG  A+ +W
Sbjct: 184 NNVTIFGESAGAAAAHYLILSPMARGLFHKAILQSG-CALNLW 225


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -2

Query: 337 NSIVVYGAQKNAVSAHFV------GALFDYVVYSSGFSAIYIW 227
           N++ ++G    A +AH++        LF   +  SG  A+ +W
Sbjct: 184 NNVTIFGESAGAAAAHYLILSPMARGLFHKAILQSG-CALNLW 225


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = -2

Query: 337 NSIVVYGAQKNAVSAHFV------GALFDYVVYSSGFSAIYIW 227
           N++ ++G    A +AH++        LF   +  SG  A+ +W
Sbjct: 183 NNVTIFGESAGAAAAHYLILSPMARGLFHKAILQSG-CALNLW 224


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +3

Query: 306 FFWAPYTTMELNRXTRPAHLVMXPXRA 386
           FFW+     EL R    AHL     RA
Sbjct: 571 FFWSLLRIYELARKAAFAHLNSNEARA 597


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,555
Number of Sequences: 336
Number of extensions: 1790
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)