Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120804.seq
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   0.68 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   6.4  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   8.4  
AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        23   8.4  
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        23   8.4  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 26.2 bits (55), Expect = 0.68
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 229 WLNLLSPCAMRKLATRALLSFTFNRLXSSDSTDSXXCPK 113
           WL   S  A++K A+   +S  F+R+   D      CP+
Sbjct: 100 WLVTASQSALQKFASTDWMSNPFDRVVCGDFAGPNGCPR 138


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 460 VLVGVIPLNTIXMEXKFLDIKVCGA 386
           V+  V+PLNT  +   +    VCGA
Sbjct: 784 VVQKVVPLNTFLLPKLWFVASVCGA 808


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 256 SSGFSAIYIWLNLLSPCAMRKLATRALL 173
           S GF  +YI+LN +      KLA R L+
Sbjct: 76  SPGFVGLYIFLNPVLLVTDLKLAKRILI 103


>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 308 FLGTVYDYGVKSP 346
           F+GT+ DYG+  P
Sbjct: 93  FIGTLIDYGLNDP 105


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 308 FLGTVYDYGVKSP 346
           F+GT+ DYG+  P
Sbjct: 93  FIGTLIDYGLNDP 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,008
Number of Sequences: 2352
Number of extensions: 7520
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)