Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120801.seq
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   3.7  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   6.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.5  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   6.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.5  

>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 129 NLGNNRYQPGYQLSNNRFVSTSDINRITRNNDVPNIR 239
           N   +RY+P  Q    RF S +D     R   +P+IR
Sbjct: 34  NYLTDRYKPIGQSLQTRFSSEADTRIAVRATTLPDIR 70


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 25/87 (28%), Positives = 36/87 (41%)
 Frame = +3

Query: 27  KLYPNQASFLADNTRLLTSTPAGFTNVLNAPSVRNLGNNRYQPGYQLSNNRFVSTSDINR 206
           KL P     +  N  L  S   G TN+L  P  R++     Q G+Q + N  V+   I +
Sbjct: 45  KLPPELIDAVLSNVDLHWSC-IGCTNMLKNPRCRSVKEIGAQVGFQAALNSAVAA--IGK 101

Query: 207 ITRNNDVPNIRNVFQGFQTLK*THCAN 287
           +     V  +R+ F   QT    H  N
Sbjct: 102 LV-EPIVAEVRSGFTLLQTASTPHNRN 127


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
 Frame = +1

Query: 376 RAHARRCSKRTAAKPPFT*SHENLESSRSGHT-LGRRRLSFVYRRPLVQDXINAINRTGG 552
           RA  RRC  R    PP T        +R   T  G++      RR   ++  N    T G
Sbjct: 500 RARRRRCRPRARRNPPATTRPVRHRPTRRKSTKRGKKDDKGYDRRSGKEERSNDNRYTNG 559

Query: 553 SYYVQG-RNAGENVESWFVI 609
           +   +G R+ G N  + FV+
Sbjct: 560 ADRDRGDRSKGMNHTNSFVV 579


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 10/47 (21%)
 Frame = -1

Query: 249 EIHCV-CW--GHRCYE*FC-------LCLKCSQTGC*IIDSPADICC 139
           ++ C  CW  GH+ +E  C       LC+KC Q G  I + P  + C
Sbjct: 327 QVKCFKCWKLGHKGFE--CTGQDRSKLCIKCGQEGHKIRECPNAMTC 371


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 78  TSTPAGFTNVLNAPSVRNLGNNRYQPGYQLSNNRFVSTSDIN 203
           +S+PA  +     P+ R+L NN +  G++   N  V  + IN
Sbjct: 240 SSSPAYSSITHYEPTARSLANNTFVDGFKF--NGLVQLNHIN 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,444
Number of Sequences: 2352
Number of extensions: 14091
Number of successful extensions: 53
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)