Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120800.seq
         (655 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g67310.1 68418.m08488 cytochrome P450 family protein                27   8.2  
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti...    27   8.2  
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi /  general...    27   8.2  
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi...    27   8.2  
At1g66130.1 68414.m07505 oxidoreductase N-terminal domain-contai...    27   8.2  
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica...    27   8.2  

>At5g67310.1 68418.m08488 cytochrome P450 family protein
          Length = 507

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 262 LKCIDFDYYGLCSKKMFCNLQTNLQKCVDQH 354
           LK  D D Y   +KK+   L   +QK VD+H
Sbjct: 238 LKLFDLDGYRKRAKKLASKLDKFMQKLVDEH 268


>At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recognition
           Nexus) repeat-containing protein contains Pfam profile
           PF02493: MORN repeat
          Length = 871

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 550 LLXQFVSANLTKSNHRCTVFLCILYGGLS 464
           L  +F    L +  H CTV +C L+ GL+
Sbjct: 359 LYGRFYFGELLEEEHGCTVDICALHSGLA 387


>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi /  general
           regulatory factor 1 (GRF1) identical to 14-3-3 protein
           GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
           thaliana]
          Length = 267

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 247 RLQSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVM 411
           RL  AL    F Y  L S    CNL    ++  D+  AELD L  + Y  + L+M
Sbjct: 178 RLGLALNFSVFYYEILNSPDRACNLA---KQAFDEAIAELDTLGEESYKDSTLIM 229


>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
           to GF14omega isoform GI:487791 from [Arabidopsis
           thaliana]
          Length = 259

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 247 RLQSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVM 411
           RL  AL    F Y  L S    CNL    ++  D+  AELD L  + Y  + L+M
Sbjct: 173 RLGLALNFSVFYYEILNSPDRACNLA---KQAFDEAIAELDTLGEESYKDSTLIM 224


>At1g66130.1 68414.m07505 oxidoreductase N-terminal
           domain-containing protein similar to AX110P [Daucus
           carota] GI:285739; contains Pfam profile PF01408:
           Oxidoreductase family NAD-binding Rossmann fold
          Length = 364

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 418 CYQNGAYRLNGQIDLHLNRHIKCIKTQYNDGLI 516
           C  NG   ++G I LH  R +K   T ++ GL+
Sbjct: 119 CEYNGVQFMDGTIWLHHQRTVKIRDTMFDSGLL 151


>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
           to GF14 protein phi chain GI:1493805, SP:P46077 from
           [Arabidopsis thaliana]
          Length = 267

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 247 RLQSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVM 411
           RL  AL    F Y  L S    CNL    ++  D+  AELD L  + Y  + L+M
Sbjct: 179 RLGLALNFSVFYYEILNSPDRACNLA---KQAFDEAIAELDTLGEESYKDSTLIM 230


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,216,758
Number of Sequences: 28952
Number of extensions: 253969
Number of successful extensions: 586
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)