Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120799.seq
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   1.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 231 RNQTNRNVSALTAVSDQSRWLEINQFSAWERRDNQYAHKWLIKV 362
           RN  N N+ ++   +D  + LEI+     +  DN+    W +K+
Sbjct: 573 RNIKNFNIPSILQFNDGLKNLEIHVTKDTDTLDNEMRGAWPLKL 616


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 429 CNLGFHNYYKLFRRCLSMLLF 491
           C++    Y+ L  RCL+ L+F
Sbjct: 377 CDINSIQYFCLMARCLNTLIF 397


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 198 VFASVVFWQAIIKKIRKQFSASINIRCVRIEFFKNY 91
           VFA+  F+      I + F+A +    V ++F  NY
Sbjct: 293 VFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNY 328


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 198 VFASVVFWQAIIKKIRKQFSASINIRCVRIEFFKNY 91
           VFA+  F+      I + F+A +    V ++F  NY
Sbjct: 613 VFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNY 648


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 10   ANSRKPFLFYNEDYYCEKPKRY 75
            ANS KP+LF   ++  E+ K +
Sbjct: 1038 ANSDKPYLFETVEFGREEGKEH 1059


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,897
Number of Sequences: 336
Number of extensions: 2798
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)