Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120797.seq
(481 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 122 3e-27
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 119 4e-26
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 117 1e-25
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 106 2e-22
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 91 2e-17
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 89 4e-17
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 87 1e-16
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 81 1e-14
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 81 1e-14
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 79 7e-14
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 77 2e-13
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 72 6e-12
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 60 2e-08
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 59 6e-08
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 56 3e-07
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 56 4e-07
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 53 4e-06
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 51 1e-05
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 51 1e-05
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 49 5e-05
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 39 0.067
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 38 0.088
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 38 0.12
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 38 0.12
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 38 0.12
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 36 0.62
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 36 0.62
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 34 1.4
UniRef50_Q8XQQ9 Cluster: Sensor protein; n=5; Proteobacteria|Rep... 33 2.5
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 33 3.3
UniRef50_Q3JBJ1 Cluster: Sulfite reductase (NADPH) hemoprotein, ... 33 4.4
UniRef50_Q7SAV4 Cluster: Predicted protein; n=1; Neurospora cras... 33 4.4
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 33 4.4
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 32 5.8
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 122 bits (295), Expect = 3e-27
Identities = 58/77 (75%), Positives = 63/77 (81%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXT 382
++E KGP + LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQ T
Sbjct: 43 AKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQIT 102
Query: 383 SINIEPGVEVXVTXADA 433
SI+IEPGVEV VT ADA
Sbjct: 103 SISIEPGVEVEVTIADA 119
Score = 81.4 bits (192), Expect = 1e-14
Identities = 41/56 (73%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTK 59
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 119 bits (286), Expect = 4e-26
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +2
Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
KGP + LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ TSINIEPGV
Sbjct: 53 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGV 112
Query: 407 EVXVTXAD 430
EV VT A+
Sbjct: 113 EVEVTIAN 120
Score = 90.6 bits (215), Expect = 2e-17
Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTK 61
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 117 bits (282), Expect = 1e-25
Identities = 55/78 (70%), Positives = 64/78 (82%)
Frame = +2
Query: 197 QWSQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQ 376
Q ++ + KGP ++LRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIVKQ
Sbjct: 405 QRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIVKQ 464
Query: 377 XTSINIEPGVEVXVTXAD 430
TSI++EPGVEV VT A+
Sbjct: 465 ITSISLEPGVEVEVTIAN 482
Score = 38.3 bits (85), Expect = 0.088
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 192 LINGAKKQKLRVKGPVRMPTK 254
LI KKQKL+VKGPVRMPTK
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTK 423
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 106 bits (255), Expect = 2e-22
Identities = 49/75 (65%), Positives = 61/75 (81%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXT 382
+++ + KGP ++L+ITTRKTP GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQ T
Sbjct: 43 AKDKQLRVKGPVRLPTKILKITTRKTPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQIT 102
Query: 383 SINIEPGVEVXVTXA 427
SI+IEPGVEV VT A
Sbjct: 103 SIHIEPGVEVEVTIA 117
Score = 80.6 bits (190), Expect = 2e-14
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = +3
Query: 99 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTK 59
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 90.6 bits (215), Expect = 2e-17
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +2
Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
KGP + LRITTRKTPCGEGSKTWD +QMRI+KRV+ + + E VK+ TS+ +EPGV
Sbjct: 51 KGPVRIPTKTLRITTRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPGV 110
Query: 407 EVXVTXAD 430
E+ V D
Sbjct: 111 ELEVAMFD 118
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +3
Query: 90 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTK 59
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 89.4 bits (212), Expect = 4e-17
Identities = 42/64 (65%), Positives = 46/64 (71%)
Frame = +2
Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
KGP +VLR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E Q I +EPGV
Sbjct: 52 KGPVRMPTKVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGV 111
Query: 407 EVXV 418
V
Sbjct: 112 NCDV 115
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 72 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 251
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 252 K 254
K
Sbjct: 60 K 60
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 87.4 bits (207), Expect = 1e-16
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXT 382
+++ + GP + L+ITTRKTPCG G+ TWD F+++I+KR+IDLH+P+E VK+ T
Sbjct: 40 ARDEKVTIHGPVRLPTRTLKITTRKTPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKIT 99
Query: 383 SINIEPGVEVXVTXAD 430
S +E GV+V +T D
Sbjct: 100 SFTMESGVDVSITILD 115
Score = 48.8 bits (111), Expect = 6e-05
Identities = 20/52 (38%), Positives = 36/52 (69%)
Frame = +3
Query: 99 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTR 56
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 81.4 bits (192), Expect = 1e-14
Identities = 41/56 (73%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTK 59
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +2
Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
KGP + L IT RK+PCGEGSKTWDRF+MRI+KR+IDL VK T+ I+PGV
Sbjct: 51 KGPVRMPTKTLVITVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGV 110
Query: 407 EVXVT 421
E+ +T
Sbjct: 111 EIELT 115
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/56 (48%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTK 254
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTK 59
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 78.6 bits (185), Expect = 7e-14
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = +2
Query: 197 QWSQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQ 376
Q Q + KGP + L++T RK+PCGEGSKTWDRF+MRIHKRVID K
Sbjct: 45 QRDQGAQVVFKGPVRMPTKHLKMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKD 104
Query: 377 XTSINIEPGVEV 412
T+ I PG+ V
Sbjct: 105 ITNFKIGPGINV 116
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 77.4 bits (182), Expect = 2e-13
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +2
Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
+GP P + LRITTR+ PCG G++T+D F++RI+KRVID +E VKQ T I +EP V
Sbjct: 55 RGPIPMPRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDV 114
Query: 407 EVXVT 421
V V+
Sbjct: 115 HVEVS 119
Score = 48.8 bits (111), Expect = 6e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +3
Query: 66 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 245
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 246 PTK 254
P +
Sbjct: 61 PRR 63
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 72.1 bits (169), Expect = 6e-12
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXT 382
++E +GP + + + RK+PCGEG+ TWD+F+M+IHKR+ID HS T
Sbjct: 39 NKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDKFEMKIHKRIIDFHSNKSEFNSIT 98
Query: 383 SINIEPGVEV 412
IN++ G+E+
Sbjct: 99 PINLDNGIEI 108
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +3
Query: 135 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTK 55
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 60.5 bits (140), Expect = 2e-08
Identities = 23/69 (33%), Positives = 45/69 (65%)
Frame = +2
Query: 206 QETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTS 385
+ T KGP+P + L I TRK+PCG G++T+++++MR+H+R+ID+ + + +++
Sbjct: 29 KRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKWEMRMHRRIIDISADDKTIRRLID 88
Query: 386 INIEPGVEV 412
+ I V +
Sbjct: 89 LKIPDDVHL 97
Score = 35.9 bits (79), Expect = 0.47
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 138 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVK 44
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 58.8 bits (136), Expect = 6e-08
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXT 382
+ +T GP P + + + RK P GEGS+TWD ++MR+HKR+ID+ + ++Q
Sbjct: 31 ANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWDHWEMRVHKRLIDISADERALRQIM 90
Query: 383 SINIEPGVEVXV 418
I + V + +
Sbjct: 91 RIQVPRDVNIEI 102
Score = 34.7 bits (76), Expect = 1.1
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 132 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
+ RI L+ N R L+++C+ + A K + + GPV +PT+
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTR 47
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +2
Query: 317 QMRIHKRVIDLHSPSEIVKQXTSINIEPGVEVXVTXADA 433
+M+IH ++IDL SPSEIVKQ TS++IEP VE VT ADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +2
Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
+GP P + L +T R+ P G+G T+D ++MRIHKRV+D+ + ++Q + I V
Sbjct: 54 RGPIPLPTRRLMVTVRRAPSGQGYHTYDHWEMRIHKRVVDMDADERALRQLMRLRIPEDV 113
Query: 407 EVXV 418
+V +
Sbjct: 114 KVEI 117
Score = 34.3 bits (75), Expect = 1.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTR 62
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 52.8 bits (121), Expect = 4e-06
Identities = 19/72 (26%), Positives = 39/72 (54%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXT 382
+Q+T GP P + + + P GEG K W+ ++M++HKR+ID+ + +++Q
Sbjct: 28 AQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWEHWEMKVHKRIIDIAADERVMRQLM 87
Query: 383 SINIEPGVEVXV 418
+ + V + +
Sbjct: 88 RVRVPDDVYIEI 99
Score = 32.7 bits (71), Expect = 4.4
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 132 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 251
+ RI L S N+ SL V + N A+K ++V GP+ +PT
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPT 43
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +2
Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
+GP P + L I+T + P GEG+K +D ++MRIHKR+ID+ ++++ I + V
Sbjct: 38 RGPVPLPVKRLEISTLRLPHGEGTKVFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNV 97
Query: 407 EVXV 418
+ +
Sbjct: 98 YIEI 101
Score = 33.1 bits (72), Expect = 3.3
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 123 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
P + RI + S +V+S+E+V + A++ + V+GPV +P K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVK 46
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 230 GPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIE-PGV 406
GP + L ITTRK+PCGEG+ TW RF++R++KR + + S + PG+
Sbjct: 55 GPCRAPVRRLTITTRKSPCGEGTNTWHRFELRMYKRTFWVTCGGNDISTILSKTVVIPGI 114
Query: 407 EVXV 418
+V V
Sbjct: 115 QVTV 118
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 49.2 bits (112), Expect = 5e-05
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = +2
Query: 206 QETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 373
++T +GP P ++LR+ + G+K WD +QMRIH+R+ID+ + +K
Sbjct: 28 KQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDTYQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 38.7 bits (86), Expect = 0.067
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 69 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 248
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 249 TK 254
TK
Sbjct: 133 TK 134
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 38.3 bits (85), Expect = 0.088
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 218 AACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHS-PSEIVKQXTSINI 394
A GP P +V R T K+P + K+ ++FQ+ +HK +++L S + ++ T+ +
Sbjct: 32 ALVSGPIPLPTRVSRYTVNKSPHVD-KKSREQFQLAVHKCLLELSSFNAHLLSTFTNFQL 90
Query: 395 EPGVEVXVTXAD 430
GV++ V D
Sbjct: 91 PAGVDISVEVRD 102
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 37.9 bits (84), Expect = 0.12
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 108 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
QA +IRI L S ++ C ++ AK + RV GPV +PTK
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTK 79
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQX 379
++ TEA GP P + ++P + + F+ R H R+ID+H P ++ +
Sbjct: 63 AKATEARVSGPVPLPTKRRIFCVLRSP-HVNKDSREHFETRTHHRLIDVHQPTAQTIDAL 121
Query: 380 TSINIEPGVEVXV 418
++ + GV+V +
Sbjct: 122 MALELPSGVDVEI 134
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQX 379
++ T AA GP P + T ++P K+ ++F++R H+R+ID+ +P S+ +
Sbjct: 38 AKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSREQFEIRTHRRLIDILNPTSKTIDAL 96
Query: 380 TSINIEPGVEVXV 418
++ + GV++ +
Sbjct: 97 KTLTLPAGVDIKI 109
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 37.9 bits (84), Expect = 0.12
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 206 QETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQXT 382
+ T A +GP P ++ R T K+P + ++F++RIH R++D+ + + + V T
Sbjct: 28 KRTGADIRGPIPMPTKIKRYTVLKSP-HINKDSREQFEIRIHARMLDIVAATPDTVDSLT 86
Query: 383 SINIEPGVEVXV 418
+++ P V V V
Sbjct: 87 KLDLAPEVSVEV 98
Score = 34.3 bits (75), Expect = 1.4
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 126 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTK
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTK 43
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 35.5 bits (78), Expect = 0.62
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 251 QVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQXTSINIEPGVEVXVT 421
+V ITT + P G+G+K W R++M +H R L + ++ K + P VE+ ++
Sbjct: 60 KVESITTLRNPSGQGTKKWSRYKMIVHLRNFYLEATHQQLEKVVQFLRNFPHVEINLS 117
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 35.5 bits (78), Expect = 0.62
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQX 379
++ T A GP P + T ++P + + ++F+MR HKR+ID+ +P+ + V
Sbjct: 29 AKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSREQFEMRTHKRLIDIVNPTPKTVDSL 87
Query: 380 TSINIEPGVEVXV 418
+++ GV++ +
Sbjct: 88 MKLDLPSGVDIEI 100
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 34.3 bits (75), Expect = 1.4
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE-IVKQX 379
++ T A GP P + R T +P D++++R HKR+ID+ P++ V
Sbjct: 29 AKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARDQYEIRTHKRLIDIVDPTDKTVDAL 87
Query: 380 TSINIEPGVEVXVT 421
+++ GV+V ++
Sbjct: 88 MKLDLAAGVDVQIS 101
Score = 33.9 bits (74), Expect = 1.9
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 132 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
RIRI L + + R +++ D++ AK+ +V GP+ +PTK
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTK 45
>UniRef50_Q8XQQ9 Cluster: Sensor protein; n=5; Proteobacteria|Rep:
Sensor protein - Ralstonia solanacearum (Pseudomonas
solanacearum)
Length = 512
Score = 33.5 bits (73), Expect = 2.5
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -2
Query: 339 TLLWILI*KRSQVFEPSPQGVLRVVIRRTWLACGLGPLHAASVSWLH*LGQHRPSRASAH 160
T+ W+ +R V E + Q L +R TW+ L L AA V+ L G P R AH
Sbjct: 176 TVGWLATPQRMHVPEGADQAFLAQQLRATWIIAALSVLLAAGVAILLARGVLAPMRRLAH 235
Query: 159 CVK 151
+
Sbjct: 236 ATR 238
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQX 379
+ +T A GP P + ++P + + F+ R H+R+ID++SPS + +
Sbjct: 33 ADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-EHFETRTHRRIIDIYSPSAKTIDAL 91
Query: 380 TSINIEPGVEVXV 418
+++ GV++ V
Sbjct: 92 MKLDLPSGVDIEV 104
>UniRef50_Q3JBJ1 Cluster: Sulfite reductase (NADPH) hemoprotein,
beta subunit; n=2; cellular organisms|Rep: Sulfite
reductase (NADPH) hemoprotein, beta subunit -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 579
Score = 32.7 bits (71), Expect = 4.4
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 179 GLC*PNQWSQETEAACKGPSPHANQVLRITTRKT 280
G+C P QW Q E A K +AN LRITTR+T
Sbjct: 85 GVCMPKQWLQLDELARK----YANNSLRITTRQT 114
>UniRef50_Q7SAV4 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 554
Score = 32.7 bits (71), Expect = 4.4
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 82 CQAKTLRNPRQRSPLSTASGSLLLHAMCARSRRSVLT*SMEPR-NRSCV*RAQSACQPSP 258
C ++ LR PRQ + +T G+ A C R R+ + PR R+ + + A +P P
Sbjct: 16 CHSQKLRCPRQDNYRTTKDGTSEQPAPCVRCERAKVACVFSPRQRRTVIPKLAGASKPPP 75
Query: 259 AYHH 270
+H
Sbjct: 76 PPNH 79
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 32.7 bits (71), Expect = 4.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 132 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
++RI L+S + L C +++ K+ VKGPV +PT+
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTR 52
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 32.3 bits (70), Expect = 5.8
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 132 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
RIRI L S + R +++ +++ AK+ +V GP+ MPT+
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTR 45
Score = 31.9 bits (69), Expect = 7.7
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 203 SQETEAACKGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE-IVKQX 379
++ T A GP P ++ R +P D++++R +KR+ID+ P++ V
Sbjct: 29 AKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARDQYEIRTYKRLIDIVQPTDKTVDAL 87
Query: 380 TSINIEPGVEVXV 418
+++ GV+V +
Sbjct: 88 MKLDLAAGVDVQI 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,991,790
Number of Sequences: 1657284
Number of extensions: 10119318
Number of successful extensions: 23372
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 22886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23364
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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