Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120797.seq
         (481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   7.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   7.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   9.5  

>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 411 TSTPGSMLIEVICFTISEGECRSITLLW 328
           +S+P +     +C+ +SE E   I +L+
Sbjct: 79  SSSPRTRQFRSVCYYVSESEMEKIEMLF 106


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 344 RSLSCGFSSENDPRSLNLHHKEFYGW 267
           R   C    E + R  N++ +EFY W
Sbjct: 377 RYAECSKRKEQN-RMFNINEREFYNW 401


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 410  PLHRARC*LRXSVSRFQRESVGR 342
            P H  R  L  S S  +R SVGR
Sbjct: 936  PRHSERALLSDSTSSSERNSVGR 958


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,722
Number of Sequences: 2352
Number of extensions: 11314
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)