Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120797.seq
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   119   2e-27
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   119   2e-27
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   119   2e-27
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   117   7e-27
BT011057-1|AAR31128.1|  996|Drosophila melanogaster RE40649p pro...    31   1.1  
BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p pro...    29   3.3  
AE014297-3844|AAF56499.2|  883|Drosophila melanogaster CG31094-P...    29   3.3  
AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-P...    29   3.3  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/68 (80%), Positives = 59/68 (86%)
 Frame = +2

Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
           KGP     + LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ TSINIEPGV
Sbjct: 53  KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGV 112

Query: 407 EVXVTXAD 430
           EV VT A+
Sbjct: 113 EVEVTIAN 120



 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = +3

Query: 90  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTK 61


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/68 (80%), Positives = 59/68 (86%)
 Frame = +2

Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
           KGP     + LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ TSINIEPGV
Sbjct: 53  KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGV 112

Query: 407 EVXVTXAD 430
           EV VT A+
Sbjct: 113 EVEVTIAN 120



 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = +3

Query: 90  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTK 61


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  119 bits (286), Expect = 2e-27
 Identities = 55/68 (80%), Positives = 59/68 (86%)
 Frame = +2

Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
           KGP     + LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ TSINIEPGV
Sbjct: 53  KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGV 112

Query: 407 EVXVTXAD 430
           EV VT A+
Sbjct: 113 EVEVTIAN 120



 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 44/56 (78%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = +3

Query: 90  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTK 61


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  117 bits (282), Expect = 7e-27
 Identities = 54/68 (79%), Positives = 59/68 (86%)
 Frame = +2

Query: 227 KGPSPHANQVLRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQXTSINIEPGV 406
           +GP     + LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ TSINIEPGV
Sbjct: 53  EGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGV 112

Query: 407 EVXVTXAD 430
           EV VT A+
Sbjct: 113 EVEVTIAN 120



 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 42/56 (75%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
 Frame = +3

Query: 90  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 254
           KDIEKP   + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTK 61


>BT011057-1|AAR31128.1|  996|Drosophila melanogaster RE40649p
           protein.
          Length = 996

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +2

Query: 179 GLC*PNQWSQETEAACKGPSPHANQVLRITTR--KTPCGEG 295
           G C PN+W  + E+ C   S  AN++   T R  +  CG G
Sbjct: 189 GNCIPNKWRCDQESDCADGSDEANELCNQTCRADEFTCGNG 229


>BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p
           protein.
          Length = 1037

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 179 GLC*PNQWSQETEAACKGPSPHANQVLRITT 271
           G C PN+W  + E+ C   S  AN++ R  T
Sbjct: 189 GNCIPNKWRCDQESDCADGSDEANELCRART 219


>AE014297-3844|AAF56499.2|  883|Drosophila melanogaster CG31094-PA,
           isoform A protein.
          Length = 883

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 179 GLC*PNQWSQETEAACKGPSPHANQVLRITT 271
           G C PN+W  + E+ C   S  AN++ R  T
Sbjct: 41  GNCIPNKWRCDQESDCADGSDEANELCRART 71


>AE014297-3843|AAF56500.3| 1031|Drosophila melanogaster CG31094-PB,
           isoform B protein.
          Length = 1031

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 179 GLC*PNQWSQETEAACKGPSPHANQVLRITT 271
           G C PN+W  + E+ C   S  AN++ R  T
Sbjct: 189 GNCIPNKWRCDQESDCADGSDEANELCRART 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,848,671
Number of Sequences: 53049
Number of extensions: 489780
Number of successful extensions: 1053
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)