Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120792.seq
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like...    33   0.33 
AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA...    33   0.33 
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei...    29   7.2  

>AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like
           kinetochore motorprotein CENP-meta protein.
          Length = 2244

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 292 SDKIDGFHDNIQYFK--DEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIETYEKY 453
           +DKI     ++Q F   ++H+ V C+    LK K A++    D  +++S+   E+Y
Sbjct: 505 TDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKERY 560


>AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA
           protein.
          Length = 2013

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 292 SDKIDGFHDNIQYFK--DEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIETYEKY 453
           +DKI     ++Q F   ++H+ V C+    LK K A++    D  +++S+   E+Y
Sbjct: 505 TDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKERY 560


>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
           protein.
          Length = 4167

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 370 SVLKSKFAKILKSHDYTDKKSIETYEKYCLPQLVGKHNDCYVAV 501
           SV+  KF  + +  D   KKS + ++K C   L+ +  D Y+ +
Sbjct: 309 SVVLKKFESVRREFDKEVKKSFDEWQKNCCSLLLNQKLDRYLLI 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,728,779
Number of Sequences: 53049
Number of extensions: 536397
Number of successful extensions: 1555
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)