Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120788.seq
         (587 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0706 + 5811722-5814025                                           27   8.4  
09_04_0504 + 18180321-18181013                                         27   8.4  

>11_01_0706 + 5811722-5814025
          Length = 767

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -1

Query: 524 DNHLKSPKKIDVQEQLPAMC--GLAQSHKPAPVPALRNNT-SVMSLCGKSLT 378
           DNHL      D+   +P++C   L++++   P+P + N++ S + L    LT
Sbjct: 295 DNHLAGIIPSDIAYTIPSLCHLDLSRNNLTGPIPIIENSSLSELILRSNQLT 346


>09_04_0504 + 18180321-18181013
          Length = 230

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 547 IIEP*SPETTT*KAPRKSTCRNSCQPCVVL 458
           +  P +PE TT KAP   T   + QP V L
Sbjct: 152 VAAPTAPEATTKKAPEDLTAAAATQPAVAL 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,366,782
Number of Sequences: 37544
Number of extensions: 279588
Number of successful extensions: 597
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)