Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120788.seq
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    24   0.96 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.9  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   3.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   3.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   3.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   3.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.8  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 471 GWQLFLHVDFLGAF*VVVSGLXGSIILWGNPKGV 572
           G Q  L VDF      ++  L G II+W +P G+
Sbjct: 258 GAQGKLIVDFFMILNEIIMKLVGIIIMWYSPFGI 291


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 473 LAAVPARRFSWGFLGGCLW 529
           +A       +WGF+G  LW
Sbjct: 408 IAGTICENSAWGFVGNSLW 426


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 287 QGTMYFIITYQCKGLLVTQPYQL 355
           +GT YF+  Y+ K + VT P  L
Sbjct: 662 EGTSYFLNDYKHKDVDVTLPLDL 684


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 444 FMALGKTTHGWQL 482
           F+ L  T+HGWQ+
Sbjct: 4   FLLLLSTSHGWQI 16


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 444 FMALGKTTHGWQL 482
           F+ L  T+HGWQ+
Sbjct: 9   FLLLLSTSHGWQI 21


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 334 SYTTLSVSVMNPHLMVRLFPQRDITDVLFLSAGT 435
           +YT+L +++ NP     L  +R   DV  L   T
Sbjct: 581 TYTSLQMAMKNPIEFTDLSNERKYEDVCVLKTDT 614


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 444 FMALGKTTHGWQL 482
           F+ L  T+HGWQ+
Sbjct: 9   FLLLLSTSHGWQI 21


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 524 DNHLKSPKKIDVQEQ 480
           +NHLK+ K +DV E+
Sbjct: 363 ENHLKNAKYLDVIER 377


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 524 DNHLKSPKKIDVQEQ 480
           +NHLK+ K +DV E+
Sbjct: 363 ENHLKNAKYLDVIER 377


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 524 DNHLKSPKKIDVQEQ 480
           +NHLK+ K +DV E+
Sbjct: 363 ENHLKNAKYLDVIER 377


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,665
Number of Sequences: 438
Number of extensions: 3706
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)