Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120783.seq
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   3.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 222 IVVEIFKIGFLKHCSKRVVKR 160
           I+   F+ GF K C  ++VK+
Sbjct: 355 IISSKFRSGFFKLCGMKIVKK 375


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +3

Query: 255 LTMYN-ERIRAALNRPARFNDQTTNVNIAY 341
           +  YN ER+   L R  RFND    +  AY
Sbjct: 240 IARYNFERLCNKLKRATRFNDFNEAIKEAY 269


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 157 CCWPHL*SIPSTLTNGALETL 95
           CCW    SIP  + N    TL
Sbjct: 13  CCWGKSLSIPQQILNEFKSTL 33


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 321 TNVNIAYVFLFFICIVLLNVLV 386
           T++ + Y ++F++   +L VLV
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLV 105


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 321 TNVNIAYVFLFFICIVLLNVLV 386
           T++ + Y ++F++   +L VLV
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLV 105


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 321 TNVNIAYVFLFFICIVLLNVLV 386
           T++ + Y ++F++   +L VLV
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLV 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,135
Number of Sequences: 336
Number of extensions: 3232
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)