Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120783.seq
         (643 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023584-1|AAH23584.1|  329|Homo sapiens FtsJ homolog 1 (E. coli...    31   2.6  
AJ005892-1|CAA06749.1|  329|Homo sapiens JM23 protein.                 31   2.6  
AF063015-1|AAC33734.1|  327|Homo sapiens cell division protein p...    31   2.6  
BC031265-1|AAH31265.1|  305|Homo sapiens tetraspanin 12 protein.       30   6.1  
AY358703-1|AAQ89066.1|  305|Homo sapiens NET-2 protein.                30   6.1  
AF124522-1|AAD17317.1|  305|Homo sapiens tetraspan NET-2 protein.      30   6.1  
AC004456-1|AAQ96879.1|  305|Homo sapiens unknown protein.              30   6.1  

>BC023584-1|AAH23584.1|  329|Homo sapiens FtsJ homolog 1 (E. coli)
           protein.
          Length = 329

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 534 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 629
           R R   KLL++DK+F + + V   +DLC  PG
Sbjct: 22  RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPG 53


>AJ005892-1|CAA06749.1|  329|Homo sapiens JM23 protein.
          Length = 329

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 534 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 629
           R R   KLL++DK+F + + V   +DLC  PG
Sbjct: 22  RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPG 53


>AF063015-1|AAC33734.1|  327|Homo sapiens cell division protein
           protein.
          Length = 327

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 534 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 629
           R R   KLL++DK+F + + V   +DLC  PG
Sbjct: 22  RARSAFKLLQLDKEFQLFQGVTRAVDLCAAPG 53


>BC031265-1|AAH31265.1|  305|Homo sapiens tetraspanin 12 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 310 TIKRPMLILPMYFCSLFVLFC 372
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


>AY358703-1|AAQ89066.1|  305|Homo sapiens NET-2 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 310 TIKRPMLILPMYFCSLFVLFC 372
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


>AF124522-1|AAD17317.1|  305|Homo sapiens tetraspan NET-2 protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 310 TIKRPMLILPMYFCSLFVLFC 372
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


>AC004456-1|AAQ96879.1|  305|Homo sapiens unknown protein.
          Length = 305

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 310 TIKRPMLILPMYFCSLFVLFC 372
           T+KR +L+L  YF SL V+FC
Sbjct: 85  TVKRNLLLLAWYFGSLLVIFC 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,980,080
Number of Sequences: 237096
Number of extensions: 1654911
Number of successful extensions: 3894
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3886
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)