Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120783.seq
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p pro...    30   2.3  
AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA...    30   2.3  
AY071418-1|AAL49040.1|  250|Drosophila melanogaster RE49934p pro...    28   9.4  
AE014297-2714|AAF55704.1|  250|Drosophila melanogaster CG11447-P...    28   9.4  

>AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p
           protein.
          Length = 817

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 483 QVGGLRSLKLFD--KRPTRRPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 629
           +VG  R  K +   K    R R   KL+++++KF   +     LDLC  PG
Sbjct: 6   KVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPG 56


>AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA
           protein.
          Length = 817

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 483 QVGGLRSLKLFD--KRPTRRPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPG 629
           +VG  R  K +   K    R R   KL+++++KF   +     LDLC  PG
Sbjct: 6   KVGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPG 56


>AY071418-1|AAL49040.1|  250|Drosophila melanogaster RE49934p
           protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 552 KLLEIDKKFHVCRHVDTFLDLCGGPG 629
           KLLEID K+ + R  DT L+    PG
Sbjct: 66  KLLEIDDKYGILRPGDTVLECGAAPG 91


>AE014297-2714|AAF55704.1|  250|Drosophila melanogaster CG11447-PA
           protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 552 KLLEIDKKFHVCRHVDTFLDLCGGPG 629
           KLLEID K+ + R  DT L+    PG
Sbjct: 66  KLLEIDDKYGILRPGDTVLECGAAPG 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,933,709
Number of Sequences: 53049
Number of extensions: 575694
Number of successful extensions: 1421
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)