Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120779.seq
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   1.2  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   6.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   6.7  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.8  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 99  CR*VYKNETCQMQQSSNGHRNCK 167
           C+  +K +TC ++ S   H  CK
Sbjct: 132 CKNGWKGKTCSLKDSHCDHTTCK 154


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 304 ISRVLSIAMYLLSANLISEFHSFLNCLDFLNQIRPIRRFFGSFHRCLQ 161
           ++RV+ I   L+   +I E  + L+ +DF   +RP   F     R L+
Sbjct: 35  LNRVVLILKVLVDQVMILETMTPLDFMDFRCYLRPASGFQSLQFRLLE 82


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 304 ISRVLSIAMYLLSANLISEFHSFLNCLDFLNQIRPIRRFFGSFHRCLQ 161
           ++RV+ I   L+   +I E  + L+ +DF   +RP   F     R L+
Sbjct: 95  LNRVVLILKVLVDQVMILETMTPLDFMDFRCYLRPASGFQSLQFRLLE 142


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 304 ISRVLSIAMYLLSANLISEFHSFLNCLDFLNQIRPIRRFFGSFHRCLQ 161
           ++RV+ I   L+   +I E  + L+ +DF   +RP   F     R L+
Sbjct: 95  LNRVVLILKVLVDQVMILETMTPLDFMDFRCYLRPASGFQSLQFRLLE 142


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 466 AFPENPFCLQKTRGSVVAPSTDRLSLKC 549
           A  E P    K   ++V   TD   +KC
Sbjct: 230 ALMEQPLAQTKKLATIVGCGTDETMIKC 257


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 466 AFPENPFCLQKTRGSVVAPSTDRLSLKC 549
           A  E P    K   ++V   TD   +KC
Sbjct: 230 ALMEQPLAQTKKLATIVGCGTDETMIKC 257


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 405 PLVTNFTNKMEFVVTETNDTSIPGEPILFTE 497
           P++  +T +   +V     T  PG P  F E
Sbjct: 300 PMIFGYTTREGMIVEMMRKTETPGMPNDFEE 330


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 404 MESIVYKS*CAKHHGGNLPSVCFVSKY 324
           ++ + Y   C K      PSV F+S+Y
Sbjct: 41  LQELKYTKRCIKETLRLFPSVPFISRY 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,591
Number of Sequences: 336
Number of extensions: 3307
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)