Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120779.seq
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029655-1|ABL75713.1| 614|Drosophila melanogaster IP17240p pro... 29 4.1
EF058004-1|ABL84939.1| 1200|Drosophila melanogaster Nup133 protein. 29 7.2
EF058010-1|ABL84945.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058009-1|ABL84944.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058008-1|ABL84943.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058007-1|ABL84942.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058006-1|ABL84941.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058005-1|ABL84940.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058003-1|ABL84938.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058002-1|ABL84937.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058001-1|ABL84936.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
EF058000-1|ABL84935.1| 1200|Drosophila melanogaster Nup133 protein. 28 9.6
BT003226-1|AAO24981.1| 1200|Drosophila melanogaster LP09464p pro... 28 9.6
AE014297-3210|AAF56042.2| 1200|Drosophila melanogaster CG6958-PA... 28 9.6
>BT029655-1|ABL75713.1| 614|Drosophila melanogaster IP17240p
protein.
Length = 614
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1
Query: 160 IVNSDEKIQKTYELAEFDLKNLSSLESYETLKLNWRSAN 276
+V+SD ++ Y A+FD+ NL++ E+Y L ++ R AN
Sbjct: 338 LVDSDGRLVDIY--AKFDVINLAAEETYNDLDVSLRKAN 374
>EF058004-1|ABL84939.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIADIRSDYNSVESFGCP 87
>EF058010-1|ABL84945.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058009-1|ABL84944.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058008-1|ABL84943.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058007-1|ABL84942.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058006-1|ABL84941.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058005-1|ABL84940.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058003-1|ABL84938.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058002-1|ABL84937.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058001-1|ABL84936.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>EF058000-1|ABL84935.1| 1200|Drosophila melanogaster Nup133 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>BT003226-1|AAO24981.1| 1200|Drosophila melanogaster LP09464p
protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
>AE014297-3210|AAF56042.2| 1200|Drosophila melanogaster CG6958-PA
protein.
Length = 1200
Score = 28.3 bits (60), Expect = 9.6
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -3
Query: 634 RPNVLG*SARCSYRFQSLLKPSVSNSRLSILTIDGLSTEPQQTPSFSVNKMGSP 473
R ++ G SA C+ SL + +++NSRLS+ S ++ SV G P
Sbjct: 34 RKSIFGGSASCAQMSGSLKRTALTNSRLSLSVRSTQSIAGIRSDYNSVESFGCP 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,200,831
Number of Sequences: 53049
Number of extensions: 607538
Number of successful extensions: 1487
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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