Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120778.seq
(638 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q00732 Cluster: p48 protein; n=16; Nucleopolyhedrovirus... 212 5e-54
UniRef50_P24651 Cluster: p48 protein; n=7; Nucleopolyhedrovirus|... 157 3e-37
UniRef50_Q4KSY4 Cluster: P45; n=3; Nucleopolyhedrovirus|Rep: P45... 126 6e-28
UniRef50_A0EYY5 Cluster: P45; n=4; Nucleopolyhedrovirus|Rep: P45... 106 5e-22
UniRef50_Q7T9U6 Cluster: ORF_69; n=9; Granulovirus|Rep: ORF_69 -... 93 5e-18
UniRef50_Q54J65 Cluster: MAP kinase phosphatase; n=2; Dictyostel... 35 1.4
UniRef50_Q5CQQ4 Cluster: Possible 2 TPR domains at N-terminus; n... 35 1.9
UniRef50_Q28J42 Cluster: Dihydrofolate reductase; n=4; Euteleost... 34 2.5
UniRef50_UPI00006CFFE0 Cluster: hypothetical repeat containing p... 33 4.4
UniRef50_Q23C37 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_O96205 Cluster: Putative uncharacterized protein PFB056... 33 4.4
UniRef50_A0C6M6 Cluster: Chromosome undetermined scaffold_152, w... 33 4.4
UniRef50_Q7Z9Z4 Cluster: Nitrogen regulatory GATA-factor; n=2; C... 33 4.4
UniRef50_A7JMK9 Cluster: Predicted protein; n=1; Francisella tul... 33 5.8
UniRef50_A5AXY2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q4HIY0 Cluster: Methyl-accepting chemotaxis protein; n=... 33 7.7
UniRef50_A3RI33 Cluster: IspA; n=6; Listeria|Rep: IspA - Listeri... 33 7.7
UniRef50_Q23JB0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_Q9HBJ7 Cluster: Ubiquitin carboxyl-terminal hydrolase 2... 33 7.7
>UniRef50_Q00732 Cluster: p48 protein; n=16;
Nucleopolyhedrovirus|Rep: p48 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 387
Score = 212 bits (518), Expect = 5e-54
Identities = 99/120 (82%), Positives = 103/120 (85%), Gaps = 1/120 (0%)
Frame = +1
Query: 226 KHFFDIFAR-RFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCR 402
K+ F IF R FIKQVP FRTIMQYLQ YYNPTPAPDVD IMCQSCKPANKIQCFECKC+
Sbjct: 85 KNIFSIFLRDEFIKQVPHFRTIMQYLQKYYNPTPAPDVDAIMCQSCKPANKIQCFECKCK 144
Query: 403 YLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRPITKTXVNVINENNLITQIFVAIF 582
YLASSLSTLD GLQNGWDIFLRPMFGMPLMLYVLLR K ++INENNLITQIFV F
Sbjct: 145 YLASSLSTLDAGLQNGWDIFLRPMFGMPLMLYVLLRTDYKNESDIINENNLITQIFVQFF 204
Score = 173 bits (422), Expect = 2e-42
Identities = 81/92 (88%), Positives = 84/92 (91%)
Frame = +2
Query: 2 RFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSS 181
RFN YDRFENVCFEAQLL+DEIDSLCFLFSKYFNQSLIVD KGLTFF EFNKCIVSIKSS
Sbjct: 11 RFNIYDRFENVCFEAQLLQDEIDSLCFLFSKYFNQSLIVDSKGLTFFTEFNKCIVSIKSS 70
Query: 182 FENQANNTDNIHNVKNIFSIFLRDGSSNKCPN 277
FENQANNTDNIHNVKNIFSIFLRD + P+
Sbjct: 71 FENQANNTDNIHNVKNIFSIFLRDEFIKQVPH 102
Score = 41.9 bits (94), Expect = 0.013
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 575 QFFYNLICDKAYSLYTK 625
QFFYNLICDKAYSLYTK
Sbjct: 202 QFFYNLICDKAYSLYTK 218
>UniRef50_P24651 Cluster: p48 protein; n=7;
Nucleopolyhedrovirus|Rep: p48 protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 411
Score = 157 bits (380), Expect = 3e-37
Identities = 69/121 (57%), Positives = 89/121 (73%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 KHFFDIFAR-RFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMC-QSCKPANKIQCFECKC 399
K +F R FIKQVP F+TIM+YL+TYYNP PDV MC + C+P KI C CKC
Sbjct: 88 KSIMGMFLRDEFIKQVPHFKTIMEYLKTYYNPIAVPDVRAFMCDEQCRPGGKISCLTCKC 147
Query: 400 RYLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRPITKTXVNVINENNLITQIFVAI 579
YL+++L+TLD GLQ+GWDIFLRPMFGMPL++YV+ + + +V+NENNL+TQ+FV
Sbjct: 148 NYLSAALTTLDSGLQDGWDIFLRPMFGMPLLIYVISKTDFSSQPDVVNENNLMTQMFVQF 207
Query: 580 F 582
F
Sbjct: 208 F 208
Score = 98.7 bits (235), Expect = 1e-19
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +2
Query: 20 RFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSSFENQAN 199
RFE+V FEAQ+ + EIDSL FL +KYF+Q ++D KGLTFF EFNKCIV+IK+ FE Q
Sbjct: 21 RFEHVRFEAQMHQREIDSLTFLTAKYFDQHSLIDIKGLTFFTEFNKCIVAIKAKFEAQP- 79
Query: 200 NTDNIHNVKNIFSIFLRDGSSNKCPN 277
+++N+H +K+I +FLRD + P+
Sbjct: 80 DSENLHGIKSIMGMFLRDEFIKQVPH 105
Score = 38.3 bits (85), Expect = 0.15
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +2
Query: 575 QFFYNLICDKAYSLYTK 625
QFFYNL+CDKAYS++TK
Sbjct: 206 QFFYNLLCDKAYSMHTK 222
>UniRef50_Q4KSY4 Cluster: P45; n=3; Nucleopolyhedrovirus|Rep: P45 -
Chrysodeixis chalcites nucleopolyhedrovirus
Length = 378
Score = 126 bits (303), Expect = 6e-28
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 3/129 (2%)
Frame = +1
Query: 205 RQHTQCKKHFFDIFAR-RFIKQVPQFRTIMQYLQTYYNPTPAPDVDEI--MCQSCKPANK 375
+Q K F +F + F+ QVP+FRTIMQYLQ YY TPAP + ++ C+ C NK
Sbjct: 76 KQDNNDVKKIFSVFLKDEFMSQVPKFRTIMQYLQKYYKSTPAPSIMQLNSKCEVCS-VNK 134
Query: 376 IQCFECKCRYLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRPITKTXVNVINENNL 555
I+C CK YL+ SL+ D +Q+GWDIFLRPMFG+P+ LY++L+ T V N ++L
Sbjct: 135 IECLSCKINYLSESLTVFDTAIQDGWDIFLRPMFGLPIFLYIILKTEYDTN-GVFNADDL 193
Query: 556 ITQIFVAIF 582
IT F F
Sbjct: 194 ITNSFTQFF 202
Score = 96.7 bits (230), Expect = 4e-19
Identities = 48/91 (52%), Positives = 61/91 (67%)
Frame = +2
Query: 2 RFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSS 181
RFN +D F+NV F L EIDSL FLFSKYF+QS V+ KGLTFF EFNKC+ +K
Sbjct: 13 RFNKFDSFQNVNFRVLLSTAEIDSLAFLFSKYFDQSTNVNIKGLTFFNEFNKCVDVVKQD 72
Query: 182 FENQANNTDNIHNVKNIFSIFLRDGSSNKCP 274
F+ + +N D VK IFS+FL+D ++ P
Sbjct: 73 FDRKQDNND----VKKIFSVFLKDEFMSQVP 99
>UniRef50_A0EYY5 Cluster: P45; n=4; Nucleopolyhedrovirus|Rep: P45 -
Ecotropis obliqua NPV
Length = 397
Score = 106 bits (254), Expect = 5e-22
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Frame = +1
Query: 226 KHFFDIFARR-FIKQVPQFRTIMQYLQTYYNPTPAPDVDEI--MCQSCKPANKIQCFECK 396
K F +F + F+ Q+P F+ IMQ+LQ Y +P + +I C C P N++ C CK
Sbjct: 85 KQLFSMFLKHEFMGQIPNFKKIMQFLQKYLLTIDSPSISDINSTCNVC-PVNQLACLNCK 143
Query: 397 CRYLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLRPITKTXVNVINENNLITQIFVA 576
YL++S+S D QNGWDIFLRPMFG+PL +Y+L++ + N ++L+T F
Sbjct: 144 ILYLSASISMFDINTQNGWDIFLRPMFGLPLFIYILMKTDYDNN-GIFNSDDLMTNAFAT 202
Query: 577 IFL*LDLRQSVFFVH 621
F L +SV +++
Sbjct: 203 FFYNLLSDKSVKYIN 217
Score = 83.0 bits (196), Expect = 5e-15
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +2
Query: 26 ENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSSFENQANNT 205
+NV F QL + EIDSL FLFSKY++QS V KGLTFF EFNKC+ ++K +F+++ +N
Sbjct: 23 KNVNFSVQLTKCEIDSLTFLFSKYYDQSKYVIVKGLTFFNEFNKCVDAVKHNFDSKQDNN 82
Query: 206 DNIHNVKNIFSIFLRDGSSNKCPN 277
+ +K +FS+FL+ + PN
Sbjct: 83 E----IKQLFSMFLKHEFMGQIPN 102
>UniRef50_Q7T9U6 Cluster: ORF_69; n=9; Granulovirus|Rep: ORF_69 -
Adoxophyes orana granulovirus (AoGV)
Length = 396
Score = 93.1 bits (221), Expect = 5e-18
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 KHFFDIFARR-FIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCR 402
K F +F FI QVP F+ IM+ L YY + + C +C +K++C +C+
Sbjct: 100 KQIFKLFVENDFIGQVPMFQIIMKNLLPYYKSIEKLENIQY-CDNCATKSKLECLKCRAT 158
Query: 403 YLASSLSTLDEGLQNGWDIFLRPMFGMPLMLYVLLR-PITKTXVNVINENNLITQIFVAI 579
Y++ +LS LDE LQNGW++F RPM G+PL+ + L + + +V N +N++T +
Sbjct: 159 YMSEALSLLDESLQNGWEVFYRPMLGIPLLFFALFKSEFKEIDEDVFNVDNIVTNTLLQF 218
Query: 580 F 582
F
Sbjct: 219 F 219
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = +2
Query: 14 YDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSSFENQ 193
YD + V F L EID+L FL ++YFNQ + + LTFF +F I IK+ +E +
Sbjct: 34 YD-VKRVNFTCSLSLYEIDTLTFLLAEYFNQQHLFNFDKLTFFNQFKYVIDVIKNDYEKK 92
Query: 194 ANNTDNIHNVKNIFSIFLRDGSSNKCP 274
T++ VK IF +F+ + + P
Sbjct: 93 ---TESEAEVKQIFKLFVENDFIGQVP 116
>UniRef50_Q54J65 Cluster: MAP kinase phosphatase; n=2; Dictyostelium
discoideum|Rep: MAP kinase phosphatase - Dictyostelium
discoideum AX4
Length = 1543
Score = 35.1 bits (77), Expect = 1.4
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +2
Query: 8 NTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSSFE 187
N+++ ++ F+ + L D D L L SKY + GK + + + +N I + +++F
Sbjct: 1413 NSWEEYD--VFDCEDLAD--DGLFILISKYDRILYVWIGKDINYTQFYNSFIKNNENNFN 1468
Query: 188 NQANNTDNIHNVKN 229
N N +NI+N N
Sbjct: 1469 NSNNEINNINNNNN 1482
>UniRef50_Q5CQQ4 Cluster: Possible 2 TPR domains at N-terminus; n=2;
Cryptosporidium|Rep: Possible 2 TPR domains at
N-terminus - Cryptosporidium parvum Iowa II
Length = 1317
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 77 CFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSSF--ENQANNTDNIHNVKNIFSIFLR 250
C L + +++ GK L + F+K ++ K++ EN++NN ++I ++N+ I +
Sbjct: 120 CILLNPNWSKGWYRAGKALYYLNIFDKAVIVFKAALKRENESNNENSIKEIENLIKICEK 179
Query: 251 DGSSN 265
N
Sbjct: 180 KADHN 184
>UniRef50_Q28J42 Cluster: Dihydrofolate reductase; n=4;
Euteleostomi|Rep: Dihydrofolate reductase - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 197
Score = 34.3 bits (75), Expect = 2.5
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 95 YFNQSLIVDGKGLTFFKEFNKCIVSIKSSFENQANNTDNIHNVKNIFSIFLRD 253
YF + ++ D + TFF EF+K I +K +F + + VK +F ++ RD
Sbjct: 140 YFTK-IMADFECDTFFPEFDKNIFKLKENFPGVPSGIQEENGVKYVFQVYQRD 191
>UniRef50_UPI00006CFFE0 Cluster: hypothetical repeat containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical repeat containing protein - Tetrahymena
thermophila SB210
Length = 3732
Score = 33.5 bits (73), Expect = 4.4
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +2
Query: 164 VSIKSSFENQANNTDNIHNVKNIFSIFLRDGSSNKCP--NLGPLCNTCKHITIRRRHPTW 337
+ +K + +NNTD+I N S D S C N GPLC C + +R P
Sbjct: 387 IKLKEGYWRSSNNTDSIVYCSNQPSNCNGDESKGYCKEGNFGPLCEMCDNNGVRWGSPYM 446
Query: 338 TRSCVSRASPQTKFNVSS 391
+ T N SS
Sbjct: 447 SNGKYGCVKCSTLMNNSS 464
>UniRef50_Q23C37 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1096
Score = 33.5 bits (73), Expect = 4.4
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +1
Query: 214 TQCKKH-FFDIFARRFIK-QVPQF---RTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 378
T C + F+D ++ + Q PQ +TI+ LQTY N P CQ+C K
Sbjct: 347 TSCASNQFYDSVSKTCLSSQPPQTVCTQTIID-LQTYQNCQPCYST----CQTCSGTQKN 401
Query: 379 QCFECKCRYLASSLSTLDEGLQNG 450
QC C Y S +G+Q+G
Sbjct: 402 QCLTCMVTYPYSYNGQCIQGVQDG 425
>UniRef50_O96205 Cluster: Putative uncharacterized protein PFB0560w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0560w - Plasmodium falciparum
(isolate 3D7)
Length = 3990
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -3
Query: 174 FMETIHLLNSLKKVRPLPSTIKLWLKYFENKKHNESISSRNNCASKHTF---SKRSYVLN 4
F E I++L KK + TI KYF KHN S S+ ++ S F +KR+ +LN
Sbjct: 97 FEENINVLKKKKKKKN-SDTINYNKKYFNKNKHNGSSSNEHSSYSDENFFEAAKRNKILN 155
>UniRef50_A0C6M6 Cluster: Chromosome undetermined scaffold_152, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_152, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 2472
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +2
Query: 26 ENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCI-----VSIKSSFEN 190
EN C Q+ + + +F K FN + K LT ++ C+ ++IK ++
Sbjct: 1054 ENTCLFRQM--ESFNQQVIMFIKTFNSKIEELNKFLTLYQYVENCLYATRLITIKYLSQD 1111
Query: 191 QANNTDNIHNVKNIFSIFLRDGSSNKC 271
Q NN D N+ + F++ + KC
Sbjct: 1112 QQNNVDVKINMHQFYRPFMKRLAVGKC 1138
>UniRef50_Q7Z9Z4 Cluster: Nitrogen regulatory GATA-factor; n=2;
Candida albicans|Rep: Nitrogen regulatory GATA-factor -
Candida albicans (Yeast)
Length = 755
Score = 33.5 bits (73), Expect = 4.4
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 161 IVSIKSSFENQANNTDNIHNVKNIFSIFLRDGSSNKCPNLGPLCNTCKHITIRRRHPTWT 340
I S S+F NQ NN+ N H + + SI G+ + ++ L + H+ + PT
Sbjct: 330 ITSPTSTFSNQGNNSSNFHRLNSTVSITATPGNLLRQESMVSLPDYANHLRSMSQTPTMN 389
Query: 341 RS 346
S
Sbjct: 390 SS 391
>UniRef50_A7JMK9 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 225
Score = 33.1 bits (72), Expect = 5.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 56 RDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSSFENQANNTDNIHNVK 226
R E + C S+ F+ +D G F E +C +S K SF++Q I++ K
Sbjct: 84 RSEKATGCAFLSRIFDVVENIDNTGCQIFSEPLRCFISYKKSFDDQKRLVQTIYDGK 140
>UniRef50_A5AXY2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 509
Score = 33.1 bits (72), Expect = 5.8
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 211 HTQCKKHFFDIFARRFIKQVP-QFRTIMQYLQTYYNPTPA--PDVDEIMCQSCKPANKIQ 381
H +C H ++ + + + + + + + Y+ TP+ +++ Q C P NK
Sbjct: 417 HMRCATHVLNLIVKEGLDVIRVEIEKVCENV-AYWLTTPSRVEKFEDVARQLCLPCNKKL 475
Query: 382 CFECKCRYLASSL 420
CF+CK R+ ++ L
Sbjct: 476 CFDCKTRWNSTYL 488
>UniRef50_Q4HIY0 Cluster: Methyl-accepting chemotaxis protein; n=3;
Campylobacter|Rep: Methyl-accepting chemotaxis protein -
Campylobacter lari RM2100
Length = 381
Score = 32.7 bits (71), Expect = 7.7
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +2
Query: 26 ENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCIVSIKSSFENQANNT 205
EN+ E+ ++IDS LF + F + T + N + SI N
Sbjct: 293 ENLLLESNTTSEKIDSFETLFQQNFKNIEQIISHSSTTKENLNFIVKSINHIVALADENL 352
Query: 206 DNIHNVKNIFSIFLRDGSS 262
N HN+K FS +++D S
Sbjct: 353 QNSHNIKE-FSRYIKDDFS 370
>UniRef50_A3RI33 Cluster: IspA; n=6; Listeria|Rep: IspA - Listeria
monocytogenes
Length = 589
Score = 32.7 bits (71), Expect = 7.7
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 50 LLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFKEFNKCI-VSIKSSFENQANNTDNIHNVK 226
L +++++L + S + +SL V LT E +S+ + ENQ NN + N+
Sbjct: 166 LYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQINNLQGLSNLN 225
Query: 227 NIFSIFLRDGSSNKCPNLGPLCNTCKHITI 316
N +FL D S+N+ + PL K T+
Sbjct: 226 N---LFLLDLSANQIVDTTPLAGLTKVQTL 252
>UniRef50_Q23JB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 577
Score = 32.7 bits (71), Expect = 7.7
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 32 VCFEAQLLRDEIDSLCFLFSKYFN-QSLIVDGKGLTFFKEFNKCIVSIKSSFENQANNTD 208
V F+ Q+ + + + F + N QSL+ GL + + NK + S F NQ+NN +
Sbjct: 423 VYFDLQINKKKTYFIVFKIHTFKNSQSLVF---GLLDYNQQNKSLQQQNSLF-NQSNNNN 478
Query: 209 NIHNVKNIFSIFLRDGSSNK 268
N +N N SI + SNK
Sbjct: 479 NNNNNNNNRSISTSNNQSNK 498
>UniRef50_Q9HBJ7 Cluster: Ubiquitin carboxyl-terminal hydrolase 29;
n=10; Eutheria|Rep: Ubiquitin carboxyl-terminal
hydrolase 29 - Homo sapiens (Human)
Length = 922
Score = 32.7 bits (71), Expect = 7.7
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = -3
Query: 153 LNSLKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVL 7
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVL 507
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,353,711
Number of Sequences: 1657284
Number of extensions: 12719041
Number of successful extensions: 43574
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 40157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43482
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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