Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120778.seq
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130398-1|AAI30399.1|  912|Homo sapiens USP29 protein protein.        33   1.1  
BC130394-1|AAI30395.1|  912|Homo sapiens USP29 protein protein.        33   1.1  
AF229438-1|AAG10401.1|  922|Homo sapiens ubiquitin-specific proc...    33   1.1  
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-...    32   1.5  
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.            32   1.5  

>BC130398-1|AAI30399.1|  912|Homo sapiens USP29 protein protein.
          Length = 912

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -3

Query: 153 LNSLKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVL 7
           +N  ++ +PLP +I+  L  F   E  ++N  +  + +C ++HTFS+ S VL
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVL 507


>BC130394-1|AAI30395.1|  912|Homo sapiens USP29 protein protein.
          Length = 912

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -3

Query: 153 LNSLKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVL 7
           +N  ++ +PLP +I+  L  F   E  ++N  +  + +C ++HTFS+ S VL
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVL 507


>AF229438-1|AAG10401.1|  922|Homo sapiens ubiquitin-specific
           processing protease protein.
          Length = 922

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -3

Query: 153 LNSLKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVL 7
           +N  ++ +PLP +I+  L  F   E  ++N  +  + +C ++HTFS+ S VL
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVL 507


>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
           5-phosphatase protein.
          Length = 1258

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 104 QSLIVDGKGLTFFKEF-NKCIVSIKSSFENQANNTDNIHNVK 226
           ++++       FF EF + C+   K SFEN A ++DNI+ +K
Sbjct: 754 EAIVKTASRTKFFIEFYSTCLEEYKKSFENDAQSSDNINFLK 795


>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
          Length = 1149

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 104 QSLIVDGKGLTFFKEF-NKCIVSIKSSFENQANNTDNIHNVK 226
           ++++       FF EF + C+   K SFEN A ++DNI+ +K
Sbjct: 690 EAIVKTASRTKFFIEFYSTCLEEYKKSFENDAQSSDNINFLK 731


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,559,692
Number of Sequences: 237096
Number of extensions: 1913101
Number of successful extensions: 8332
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8332
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)