Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120778.seq
(638 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 24 1.4
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 1.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 1.9
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 3.3
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 5.8
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 21 7.6
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 21 7.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.6
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 21 7.6
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 21 7.6
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 412 SSLSTLDEGLQNGWDIFLRPMFGMP 486
S++S L + L G+D +RP FG P
Sbjct: 4 SNISELLDNLLRGYDNSVRPDFGGP 28
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 445 NGWDIFLRPMF-GMPLMLYVLLRPITKTXVNVINENNLIT 561
+G+DI LRP F G PL++ + L + ++ +N + IT
Sbjct: 46 DGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTIT 85
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 303 NILQSDAGTRRGRDHVSVVQARKQN 377
+I+Q+D TR D V ++A K+N
Sbjct: 333 DIIQNDRRTRHLSDRVVALEAEKKN 357
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 397 CRYLASSLSTLDEGLQN 447
C+ +ASS+S +EGL N
Sbjct: 595 CKVIASSVSAGEEGLGN 611
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 5.8
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 272 PNLGPLCNTCKHI 310
P+ P+CN CK +
Sbjct: 29 PSKEPICNICKRV 41
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 415 SLSTLDEGLQNGWDIFLRPMF 477
S DEG W+ LRP F
Sbjct: 16 SFEDSDEGSNWNWNTLLRPNF 36
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 415 SLSTLDEGLQNGWDIFLRPMF 477
S DEG W+ LRP F
Sbjct: 60 SFEDSDEGSNWNWNTLLRPNF 80
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 190 SSQQHRQHTQCKKHFFDIFARRFIKQVPQFR 282
S Q H+ K+ F I R + + PQ++
Sbjct: 335 SPQTHKMAPWVKRVFIHILPRLLVMRRPQYK 365
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 190 SSQQHRQHTQCKKHFFDIFARRFIKQVPQFR 282
S Q H+ K+ F I R + + PQ++
Sbjct: 335 SPQTHKMAPWVKRVFIHILPRLLVMRRPQYK 365
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 415 SLSTLDEGLQNGWDIFLRPMF 477
S DEG W+ LRP F
Sbjct: 60 SFEDSDEGSNWNWNTLLRPNF 80
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +1
Query: 415 SLSTLDEGLQNGWDIFLRPMF 477
S DEG W+ LRP F
Sbjct: 60 SFEDSDEGSNWNWNTLLRPNF 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,446
Number of Sequences: 438
Number of extensions: 3590
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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