Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120777.seq
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 180 8e-46
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 162 2e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 162 2e-40
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 136 1e-32
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 104 5e-23
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 104 5e-23
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 95 3e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 68 5e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 68 5e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 4e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 4e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 4e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 36 0.033
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.30
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.93
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.93
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.93
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 31 0.93
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 30 1.2
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 30 1.2
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.2
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.6
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.6
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 30 1.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.1
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.1
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.1
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 6.6
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 8.7
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 180 bits (438), Expect = 8e-46
Identities = 102/161 (63%), Positives = 110/161 (68%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 182
LKAER+ ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 183 FEAGISKNGQTREHALLAFTLGVKSSS*E*TKWIPLNHHTVSPDLRKSRRKYPHTSRRLA 362
FEAGISKNGQTREHALLA TLGVK + + L T SPD +SRR
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVK-------QLVSLRSPTRSPD----------SSRRSD 165
Query: 363 TTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKL 485
T Q L D TETTC C GSRDG + RK L
Sbjct: 166 TIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETL 206
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 162 bits (393), Expect = 2e-40
Identities = 76/84 (90%), Positives = 80/84 (95%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 182
LKAER+ ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 183 FEAGISKNGQTREHALLAFTLGVK 254
FEAGISKNGQTREHALLA TLGVK
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVK 146
Score = 135 bits (327), Expect = 2e-32
Identities = 70/122 (57%), Positives = 81/122 (66%)
Frame = +2
Query: 251 QKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 430
++LIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 205
Query: 431 TKMPWFKGWQVERKEGKAERKMPH*SLDAILATCPAPLTSPWRLSPGKTYYKNRVVLVTV 610
+ MPWFKGW VERKEG A K +LD+I+ P P RL Y + V V
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPP-QRPTDRPLRLPLQDVYKIGGIGTVPV 264
Query: 611 AR 616
R
Sbjct: 265 GR 266
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 162 bits (393), Expect = 2e-40
Identities = 76/84 (90%), Positives = 80/84 (95%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 182
LKAER+ ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 183 FEAGISKNGQTREHALLAFTLGVK 254
FEAGISKNGQTREHALLA TLGVK
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVK 146
Score = 135 bits (327), Expect = 2e-32
Identities = 70/122 (57%), Positives = 81/122 (66%)
Frame = +2
Query: 251 QKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 430
++LIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 205
Query: 431 TKMPWFKGWQVERKEGKAERKMPH*SLDAILATCPAPLTSPWRLSPGKTYYKNRVVLVTV 610
+ MPWFKGW VERKEG A K +LD+I+ P P RL Y + V V
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPP-QRPTDRPLRLPLQDVYKIGGIGTVPV 264
Query: 611 AR 616
R
Sbjct: 265 GR 266
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 136 bits (330), Expect = 1e-32
Identities = 70/123 (56%), Positives = 80/123 (65%)
Frame = +2
Query: 248 CQKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEP 427
C L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE
Sbjct: 111 CAVLVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEV 170
Query: 428 STKMPWFKGWQVERKEGKAERKMPH*SLDAILATCPAPLTSPWRLSPGKTYYKNRVVLVT 607
S+ MPWFKGW VERKEG A K +LD+I+ P P RL Y + V
Sbjct: 171 SSNMPWFKGWAVERKEGNASGKTLLEALDSIIPP-QRPTDRPLRLPLQDVYKIGGIGTVP 229
Query: 608 VAR 616
V R
Sbjct: 230 VGR 232
Score = 108 bits (260), Expect = 3e-24
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 167
LKAER+ ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 104 bits (250), Expect = 5e-23
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
ER+ +T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 229 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 288
Query: 192 GISKNGQTREHALLAFTLGV 251
G GQT+EHALL +LGV
Sbjct: 289 GFENGGQTKEHALLLRSLGV 308
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/68 (35%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPS 430
+LIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 310 QLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-R 364
Query: 431 TKMPWFKG 454
++ W+ G
Sbjct: 365 MELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 104 bits (250), Expect = 5e-23
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
ER+ +T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 247 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 306
Query: 192 GISKNGQTREHALLAFTLGV 251
G GQT+EHALL +LGV
Sbjct: 307 GFENGGQTKEHALLLRSLGV 326
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/68 (35%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 KLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPS 430
+LIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 328 QLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-R 382
Query: 431 TKMPWFKG 454
++ W+ G
Sbjct: 383 MELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/81 (51%), Positives = 57/81 (70%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
ER+ T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 168 EREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFET 227
Query: 192 GISKNGQTREHALLAFTLGVK 254
G + GQTREH++L T GVK
Sbjct: 228 GFDRGGQTREHSMLVKTAGVK 248
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = +2
Query: 257 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST 433
L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G + + T
Sbjct: 250 LVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPT 309
Query: 434 --KMPWFKG 454
+ W+ G
Sbjct: 310 GSEGNWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.1 bits (159), Expect = 5e-12
Identities = 39/84 (46%), Positives = 51/84 (60%)
Frame = +3
Query: 6 KAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 185
K E+ ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 87 KEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 186 EAGISKNGQTREHALLAFTLGVKS 257
E QT+EH +LA +GVK+
Sbjct: 147 E-------QTKEHLILAKQVGVKN 163
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.1 bits (159), Expect = 5e-12
Identities = 39/84 (46%), Positives = 51/84 (60%)
Frame = +3
Query: 6 KAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 185
K E+ ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 87 KEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 186 EAGISKNGQTREHALLAFTLGVKS 257
E QT+EH +LA +GVK+
Sbjct: 147 E-------QTKEHLILAKQVGVKN 163
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
E+ ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 151
Query: 192 GISKNGQTREHALLAFTLGV 251
QTREH LLA +GV
Sbjct: 152 ------QTREHLLLARQVGV 165
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
E+ ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 192 GISKNGQTREHALLAFTLGV 251
QTREH LLA +GV
Sbjct: 153 ------QTREHLLLARQVGV 166
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/80 (46%), Positives = 49/80 (61%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
E+ ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 192 GISKNGQTREHALLAFTLGV 251
QTREH LLA +GV
Sbjct: 153 ------QTREHLLLARQVGV 166
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
L+ ER+ IT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 80 LQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 27 ITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
IT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 189 ITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 75 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 236
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLA 120
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 33 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 33 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 72 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 167
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
L ER+ IT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 68 LDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
ER ITI A + + IID PGH DF + D AVL++ G G
Sbjct: 93 ERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 520 PGHLPGPTDKPLASFPWQDVLQKSGGIG 603
P LP P+ P+A PW ++ S G G
Sbjct: 410 PAPLPVPSQLPIAGIPWAELTTSSAGAG 437
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 30 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 30 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 81 IIDAPGHRDFIKNMITGTSQADCAVLIV 164
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 632 FKLCPTGPR*PIPPDFCN-TSCQGKDARGLSVGPGRWPGWHRGFNEAFSVQLCLPY 468
F CPTG PD N CQG++ G + G PG + E V+ C P+
Sbjct: 1041 FSFCPTGYTCQQQPDTLNFYCCQGEETHG--INDGCPPGQYAYVQEEGVVKSCDPF 1094
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 339 PHTSRRLATTQLLSLSCPFLD 401
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 339 PHTSRRLATTQLLSLSCPFLD 401
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 339 PHTSRRLATTQLLSLSCPFLD 401
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 339 PHTSRRLATTQLLSLSCPFLD 401
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +3
Query: 6 KAERDXRITIDIALW-KFETSK---YYVTIIDAPGHRDFI--KNMITGTSQADCAVLIVA 167
K D R T++ W ++E + V IID+ G RDFI KN+ GT AD +++ A
Sbjct: 46 KFVEDYRPTVEEFNWIEYEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFA 103
Query: 168 A 170
A
Sbjct: 104 A 104
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +3
Query: 459 RWS--VRKAKLNGKCLI--EASMPSWPPARPH*QAPGV 560
RWS ++K+++ +I EA++ SWPPA APG+
Sbjct: 611 RWSHDIKKSEIIQPLVIPVEATLESWPPAEYRYVAPGI 648
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 224 CLARFHPRCQKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 385
C+ P C K I G + M E P S + E+ + E++ + Y ++A+
Sbjct: 41 CVVTHEPTCSKYIYGTHPMSGAE-PCSPTKKEKHRFEITKKLGSGTYGKVSLAY 93
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 224 CLARFHPRCQKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 385
C+ P C K I G + M E P S + E+ + E++ + Y ++A+
Sbjct: 41 CVVTHEPTCSKYIYGTHPMSGAE-PCSPTKKEKHRFEITKKLGSGTYGKVSLAY 93
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 75 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 164
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 75 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 164
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 405 TETTCWSLQPKCLGSRDGRWSVRKAKLNGKCLIEASMPS 521
TE C +C+ ++ GRW +K +L KC EA M S
Sbjct: 64 TERKCRLSNGRCVPTKGGRWFCKKCRL-AKC-SEAGMNS 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,648,151
Number of Sequences: 27780
Number of extensions: 385823
Number of successful extensions: 1147
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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