Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120777.seq
(649 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 153 7e-38
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 153 7e-38
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 153 7e-38
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 153 7e-38
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 88 5e-18
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 84 7e-17
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 64 6e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 63 2e-10
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 37 0.013
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 37 0.013
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 35 0.054
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.054
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.054
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.16
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 33 0.22
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.22
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.29
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.29
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.38
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.38
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.5
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.5
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 29 2.0
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.0
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.0
At5g19410.1 68418.m02313 ABC transporter family protein white me... 29 3.5
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 4.7
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 4.7
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 6.1
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 6.1
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 8.1
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 8.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 153 bits (372), Expect = 7e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 182
LKAER+ ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 183 FEAGISKNGQTREHALLAFTLGVK 254
FEAGISK+GQTREHALLAFTLGVK
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVK 146
Score = 95.5 bits (227), Expect = 3e-20
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = +2
Query: 251 QKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 430
+++I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 431 TKMPWFKG 454
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 153 bits (372), Expect = 7e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 182
LKAER+ ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 183 FEAGISKNGQTREHALLAFTLGVK 254
FEAGISK+GQTREHALLAFTLGVK
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVK 146
Score = 95.5 bits (227), Expect = 3e-20
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = +2
Query: 251 QKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 430
+++I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 431 TKMPWFKG 454
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 153 bits (372), Expect = 7e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 182
LKAER+ ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 183 FEAGISKNGQTREHALLAFTLGVK 254
FEAGISK+GQTREHALLAFTLGVK
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVK 146
Score = 95.5 bits (227), Expect = 3e-20
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = +2
Query: 251 QKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 430
+++I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 431 TKMPWFKG 454
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 153 bits (372), Expect = 7e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 182
LKAER+ ITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 183 FEAGISKNGQTREHALLAFTLGVK 254
FEAGISK+GQTREHALLAFTLGVK
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVK 146
Score = 95.5 bits (227), Expect = 3e-20
Identities = 40/68 (58%), Positives = 54/68 (79%)
Frame = +2
Query: 251 QKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS 430
+++I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E S
Sbjct: 146 KQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERS 205
Query: 431 TKMPWFKG 454
T + W+KG
Sbjct: 206 TNLDWYKG 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 87.8 bits (208), Expect = 5e-18
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = +3
Query: 30 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 209
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225
Query: 210 QTREHALLAFTLGV 251
QTREH LA TLGV
Sbjct: 226 QTREHVQLAKTLGV 239
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +2
Query: 254 KLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPS 430
KLIV VNKMD +S+ R++EI++++ ++K GYN V F+PISG G NM +
Sbjct: 241 KLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRM 300
Query: 431 TK--MPWFKG 454
+ PW+ G
Sbjct: 301 GQEICPWWSG 310
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 84.2 bits (199), Expect = 7e-17
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
ER+ IT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 192 GISK-NGQTREHALLAFTLGVK 254
G GQTREHA + GV+
Sbjct: 358 GFDNLKGQTREHARVLRGFGVE 379
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = +2
Query: 251 QKLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EP 427
+++IV +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N++ P
Sbjct: 379 EQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAP 436
Query: 428 STK--MPWFKG 454
S W++G
Sbjct: 437 SDNRLSSWYQG 447
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
ER ITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 123 ERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP- 181
Query: 192 GISKNGQTREHALLAFTLGV 251
QT+EH LLA +GV
Sbjct: 182 ------QTKEHILLAKQVGV 195
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
E+ ITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 111 EKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP- 169
Query: 192 GISKNGQTREHALLAFTLGVKS 257
QT+EH LLA +GV S
Sbjct: 170 ------QTKEHILLARQVGVPS 185
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
ER+ ITI A Y V IID PGH DF + D A+L++ + G
Sbjct: 114 EREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQ 173
Query: 192 GISKNGQTREH 224
I+ + Q R +
Sbjct: 174 SITVDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +3
Query: 12 ERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 191
ER+ ITI A Y V IID PGH DF + D A+L++ + G
Sbjct: 114 EREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQ 173
Query: 192 GISKNGQTREH 224
I+ + Q R +
Sbjct: 174 SITVDRQMRRY 184
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
L E+ IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 52 LDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 27 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.054
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 27 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 57 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKF--ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 176
L+ ER I + A ++ E + + + +ID PGH DF + + + A+L+V A
Sbjct: 128 LERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 187
Query: 177 G 179
G
Sbjct: 188 G 188
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 75 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 60 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 170
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 60 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 170
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 72 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 170
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.38
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +3
Query: 54 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 170
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 81 IIDAPGHRDFIKNMITGTSQADCAVLIV 164
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 81 IIDAPGHRDFIKNMITGTSQADCAVLIV 164
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 81 IIDAPGHRDFIKNMITGTSQADCAVLIV 164
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 3 LKAERDXRITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
++ E++ ITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 139 MEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 63 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 164
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 75 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 164
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g19410.1 68418.m02313 ABC transporter family protein white
membrane transporter, Bactrocera tryoni, EMBL:U97104
Length = 624
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/82 (23%), Positives = 37/82 (45%)
Frame = -1
Query: 523 QDGIEASMRHFPFSFAFLTLHLPSLEPRHFG*RLQHVVSVPSRNGHESDSSWVVANLLDV 344
++G+ + F FS +FL P + R + V+ S G SS+++AN +
Sbjct: 395 EEGVAERLGLFAFSLSFLLSSTVEALPIYL--RERRVLMKESSRGSYRISSYMIANTIAF 452
Query: 343 *GYFLLDFLKSGLTVWWFSGIH 278
+ + L + V+W G++
Sbjct: 453 VPFLFVVSLLFSIPVYWIVGLN 474
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 355 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 456
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 302 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 391
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 308 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 418
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 84 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 179
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 284 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 397
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 284 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 397
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,996,437
Number of Sequences: 28952
Number of extensions: 371188
Number of successful extensions: 1165
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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