Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120767.seq
         (689 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein.         30   6.8  
AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein.         30   6.8  
AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein.         30   6.8  
AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein.         30   6.8  
AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein.    30   6.8  

>AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 259 QIILCHQFPYYHWKQYLLLLQHFSV-VIHLWR--YCQH 155
           +I +CH F +Y W  Y +L Q   +  + +WR   C H
Sbjct: 3   KIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAH 40


>AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 259 QIILCHQFPYYHWKQYLLLLQHFSV-VIHLWR--YCQH 155
           +I +CH F +Y W  Y +L Q   +  + +WR   C H
Sbjct: 3   KIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAH 40


>AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 259 QIILCHQFPYYHWKQYLLLLQHFSV-VIHLWR--YCQH 155
           +I +CH F +Y W  Y +L Q   +  + +WR   C H
Sbjct: 3   KIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAH 40


>AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 259 QIILCHQFPYYHWKQYLLLLQHFSV-VIHLWR--YCQH 155
           +I +CH F +Y W  Y +L Q   +  + +WR   C H
Sbjct: 3   KIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAH 40


>AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein.
          Length = 1349

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 259 QIILCHQFPYYHWKQYLLLLQHFSV-VIHLWR--YCQH 155
           +I +CH F +Y W  Y +L Q   +  + +WR   C H
Sbjct: 3   KIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAH 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,870,492
Number of Sequences: 237096
Number of extensions: 1654030
Number of successful extensions: 2732
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2732
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)