Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120767.seq
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical...    29   2.4  
Z77136-1|CAB00880.1|  606|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z81571-10|CAB04621.2|  341|Caenorhabditis elegans Hypothetical p...    29   4.1  
Z81571-1|CAB04610.1|  341|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81504-5|CAB04120.2|  341|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z99281-51|CAE18031.2|  281|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z75552-3|CAA99940.1|  465|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z71177-1|CAA94865.3|  355|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
           protein Y51A2D.15 protein.
          Length = 1222

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 127 NRNDEETCINVDNIATDESQQKNAEVKEDIASSDNMEIDDK 249
           NRN   +C +   IA  +   +N++++ED+   +N ++ D+
Sbjct: 820 NRNSTASCTSNAEIARLQVSIRNSQIQEDLVKQENTKLRDE 860


>Z77136-1|CAB00880.1|  606|Caenorhabditis elegans Hypothetical
           protein ZC376.1 protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 578 YKGRSTIYHKYIDIPMPRRPQVL 646
           YKG  T +HKY++ P P   + L
Sbjct: 372 YKGAGTAFHKYLEAPSPHHSEDL 394


>Z81571-10|CAB04621.2|  341|Caenorhabditis elegans Hypothetical
           protein M01G12.13 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -2

Query: 295 QNSHSSEYIPCIQIILCHQFPYY----HWKQYLLLLQHFSVVIHLWRYCQH 155
           Q   SS+Y+    ++L H  P+      W   L   +   +V++ W  C H
Sbjct: 128 QKCFSSKYLKKFSLVLAHFLPFVTAFCFWNSRLTAKERMDLVMNNWPQCAH 178


>Z81571-1|CAB04610.1|  341|Caenorhabditis elegans Hypothetical
           protein M01G12.1 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -2

Query: 295 QNSHSSEYIPCIQIILCHQFPYY----HWKQYLLLLQHFSVVIHLWRYCQH 155
           Q   SS+Y+    ++L H  P+      W   L   +   +V++ W  C H
Sbjct: 128 QKCFSSKYLKKFSLVLAHFLPFVTAFCFWNSRLTAKERMDLVMNNWPQCAH 178


>Z81504-5|CAB04120.2|  341|Caenorhabditis elegans Hypothetical
           protein M01G12.13 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -2

Query: 295 QNSHSSEYIPCIQIILCHQFPYY----HWKQYLLLLQHFSVVIHLWRYCQH 155
           Q   SS+Y+    ++L H  P+      W   L   +   +V++ W  C H
Sbjct: 128 QKCFSSKYLKKFSLVLAHFLPFVTAFCFWNSRLTAKERMDLVMNNWPQCAH 178


>Z99281-51|CAE18031.2|  281|Caenorhabditis elegans Hypothetical
           protein Y57G11C.48 protein.
          Length = 281

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 470 LTEIMTACIQTLLCS*STAN*SVHVFLLRRCNHK 369
           +T+ +TA +Q L  S + +  S+H +L + CN K
Sbjct: 207 ITDAITAIVQLLRVSNTKSLSSIHAYLRKNCNDK 240


>Z75552-3|CAA99940.1|  465|Caenorhabditis elegans Hypothetical
           protein W04D2.3 protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -2

Query: 241 QFPYYHWKQYLLLLQ--HFSVVIHLWRY 164
           Q  YY W  + LLLQ   F    +LW+Y
Sbjct: 100 QLSYYQWVPFFLLLQAAFFRAPSYLWKY 127


>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
            protein Y102A11A.3 protein.
          Length = 1571

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 133  NDEETCINVDNIATDESQQKNAEVKEDIASSDN 231
            N +E C   +NI + E+  K+ E  EDI   D+
Sbjct: 1151 NIQEACGQTNNIGSTETSSKSTEQSEDIDKLDH 1183


>Z71177-1|CAA94865.3|  355|Caenorhabditis elegans Hypothetical
           protein AC3.1 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 591 LRPL*AGTCDCFVTNNPKVAVSIRMDIPYNHQKTNTDWSI 472
           LR L A    CF+   P    S+ + I Y H +  T W+I
Sbjct: 252 LRSLLAQFTTCFLIVGPASLFSLLVVIRYEHSQVATHWTI 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,287,252
Number of Sequences: 27780
Number of extensions: 282577
Number of successful extensions: 742
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)