Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120767.seq
         (689 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60030.1 68418.m07527 expressed protein                             29   2.2  
At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase f...    29   2.9  
At4g10950.1 68417.m01780 GDSL-motif lipase/hydrolase family prot...    28   6.7  
At3g25200.1 68416.m03148 hypothetical protein                          27   8.9  

>At5g60030.1 68418.m07527 expressed protein
          Length = 292

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 133 NDEETCINVDNIATDESQQKNAEVKEDIASSDNMEIDDKE 252
           NDE+    VD     E +QK+AE+KE   + D   +D+KE
Sbjct: 194 NDEDV---VDEKEKLEDEQKSAEIKEKKKNKDEDVVDEKE 230


>At5g60620.1 68418.m07608 phospholipid/glycerol acyltransferase
           family protein contains Pfam PF01553: Acyltransferase
          Length = 376

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 643 NLRSPWHWNIYIFMVY 596
           N   PW+WNIY+F +Y
Sbjct: 70  NPPEPWNWNIYLFPLY 85


>At4g10950.1 68417.m01780 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL1 GI:15054382 from
           [Arabidopsis thaliana]; contains Pfam profile PF00657:
           GDSL-like Lipase/Acylhydrolase
          Length = 400

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 667 LRNISGTKNLRSPWHWNIYI 608
           +RNIS  +NL +PW++N ++
Sbjct: 213 IRNISNVQNLYTPWNFNQFL 232


>At3g25200.1 68416.m03148 hypothetical protein
          Length = 168

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 483 LCSFFDDCMVYPYGLILQLSDYWSRSNRMSQPIKDEAR 596
           + SFFDD   +    +L LS +W  ++  S  +K   R
Sbjct: 42  MLSFFDDTCTWETRTVLWLSSFWDLNSAFSDLLKATLR 79


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,045,000
Number of Sequences: 28952
Number of extensions: 244293
Number of successful extensions: 575
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)