Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120760.seq
(696 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;... 84 4e-15
UniRef50_O10372 Cluster: Occlusion-derived virus envelope protei... 80 6e-14
UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep: ... 72 1e-11
UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P4... 63 5e-09
UniRef50_P41701 Cluster: Occlusion-derived virus envelope protei... 57 4e-07
UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep: O... 50 7e-05
UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:... 45 0.002
UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5; Nucleopolyh... 43 0.008
UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:... 42 0.019
UniRef50_Q9TYU6 Cluster: Nematode polyprotein allergen related p... 37 0.54
UniRef50_O10371 Cluster: Occlusion-derived virus envelope protei... 35 1.7
UniRef50_Q8I541 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi nucleopo... 33 8.8
UniRef50_Q8R7K8 Cluster: Serine phosphatase RsbU, regulator of s... 33 8.8
>UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 484
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +1
Query: 13 FSNTVPAYLLIRGDYESSSELKSLRDLNPWVQNTLLKLLIPD 138
FSNTVPAYLL+RGDYES+SELKSLRDLNPWVQNTLL+LLI D
Sbjct: 430 FSNTVPAYLLVRGDYESTSELKSLRDLNPWVQNTLLELLIVD 471
>UniRef50_O10372 Cluster: Occlusion-derived virus envelope protein
E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E27 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 297
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +1
Query: 535 RXKKPTNWAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTPPLLEIFRNQ 696
+ +K + EFDLKNLSSLES+E K+KLALSKYMAM++TLEMT PLLE+FRN+
Sbjct: 21 KIRKTYDLNEFDLKNLSSLESFENTKVKLALSKYMAMINTLEMTQPLLEVFRNR 74
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 474 MKRVKCNKVRTVPKL*NSDEKXQKTYELGRI*FKKSKQFRKL*NSE 611
MKRV+CNKVRTV ++ ++ K +KTY+L K N++
Sbjct: 1 MKRVRCNKVRTVTEVKPNNAKIRKTYDLNEFDLKNLSSLESFENTK 46
>UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep:
Orf13 - Trichoplusia ni SNPV
Length = 296
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +1
Query: 535 RXKKPTNWAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTPPLLEIFRNQ 696
+ +K + EFD+KNL+SLESY+TLKIKL + KYMAML+TL++T PLL IFR++
Sbjct: 24 KLQKEYDLTEFDVKNLNSLESYDTLKIKLVIVKYMAMLNTLQLTQPLLTIFRDR 77
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Frame = +3
Query: 474 MKRVKCN---KVRTVPKL*NSDEKXQKTYEL 557
MKR KC KVRTV ++ NSD+K QK Y+L
Sbjct: 1 MKRFKCQSTPKVRTVTEIINSDDKLQKEYDL 31
>UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P49 -
Clanis bilineata nucleopolyhedrosis virus
Length = 498
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/42 (78%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +1
Query: 10 VFSNTVPAYLLIRGDYESSSELKSLRDL-NPWVQNTLLKLLI 132
+F NTVPAYLLIRGDYESS KSL +L N WVQNTLLKLLI
Sbjct: 430 IFGNTVPAYLLIRGDYESS--FKSLHELKNSWVQNTLLKLLI 469
>UniRef50_P41701 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 62
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
Frame = +1
Query: 370 PPSATG-FMNPLNATMRANPFMNTPQRQML 456
PP+A G F+NPLNATMRANPFMNTPQRQML
Sbjct: 33 PPNALGGFVNPLNATMRANPFMNTPQRQML 62
>UniRef50_Q0ILA8 Cluster: ORF11; n=2; Nucleopolyhedrovirus|Rep:
ORF11 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 470
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +1
Query: 13 FSNTVPAYLLIRGDYESSSELKSLRDLNPWVQNTLLKLLI 132
F N YLLIRGDYES S++K L+DL P VQN + +L+I
Sbjct: 423 FINGSSVYLLIRGDYESISDIKLLKDLTPLVQNAVFQLVI 462
>UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:
ODV-E18 - Mamestra configurata NPV-A
Length = 83
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/31 (67%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +1
Query: 370 PPSATG--FMNPLNATMRANPFMNTPQRQML 456
PP G F+NPLNATMRANPF+N QR ML
Sbjct: 53 PPGGGGNTFVNPLNATMRANPFVNPAQRNML 83
>UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5;
Nucleopolyhedrovirus|Rep: LdOrf-odv-e18 peptide -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 88
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1
Query: 373 PSATGFMNPLNATMRANPFMNTPQRQML 456
P + NPLNATMRANPF+N QR ML
Sbjct: 61 PQRYAYTNPLNATMRANPFVNNAQRSML 88
>UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:
Odv-e27 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 284
Score = 41.5 bits (93), Expect = 0.019
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 562 EFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTPPLLEIFRNQ 696
E + KNL+SL SY+ ++ L+KY+AML LE + L+ FR++
Sbjct: 28 ELNDKNLNSLVSYDNFNTRMVLAKYIAMLHMLETSQSLIATFRDR 72
>UniRef50_Q9TYU6 Cluster: Nematode polyprotein allergen related
protein 1, isoform a; n=7; Caenorhabditis|Rep: Nematode
polyprotein allergen related protein 1, isoform a -
Caenorhabditis elegans
Length = 1440
Score = 36.7 bits (81), Expect = 0.54
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 502 ERYRN-CKTAMKRXKKPTNWAEFDLKNLSSLESYETLKIKL 621
E+++N C T K KPT W E +K L + E + TLK+KL
Sbjct: 1215 EKFQNQCMTWAKEVSKPTEWEE--IKKLHAAEDFNTLKLKL 1253
>UniRef50_O10371 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 85
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 373 PSATGFMN-PLNATMRANPFMNTPQR 447
P+A M PLN TMRANPF+ TPQR
Sbjct: 59 PAAVPQMGFPLNTTMRANPFVATPQR 84
>UniRef50_Q8I541 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 349
Score = 33.1 bits (72), Expect = 6.7
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 496 KFERYRNCKTAMKRXK-KPTNWAEFDLKNLSSLESYETLKIKL 621
K+ Y NC T + R K KP N FD+ N +L+ Y L I+L
Sbjct: 167 KYYNYTNCPTLLNREKTKPKN-DSFDIYNQYNLQKYYLLNIQL 208
>UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: Odv-e18 - Antheraea pernyi
nuclear polyhedrosis virus (ApNPV)
Length = 68
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 155 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTI 253
MIY D S NYLN+LTPN FL I
Sbjct: 1 MIYTDPTTGATTNTDATSNNYLNKLTPNTFLII 33
>UniRef50_Q8R7K8 Cluster: Serine phosphatase RsbU, regulator of
sigma subunit; n=3; Thermoanaerobacter|Rep: Serine
phosphatase RsbU, regulator of sigma subunit -
Thermoanaerobacter tengcongensis
Length = 785
Score = 32.7 bits (71), Expect = 8.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 641 AMYLLSANLIFRVS*LSKLLRFFKSNSAQFVGFLXLFIAVLQFRYRSNFVAFDTF 477
A YLLS +IF + L +R + A F+ LF + L F Y NF+ FD F
Sbjct: 89 AKYLLSMAIIFLLE-LFLRVRPTNALKASFITLFSLFASGLIFSYSYNFLYFDVF 142
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,289,307
Number of Sequences: 1657284
Number of extensions: 9176574
Number of successful extensions: 18626
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18624
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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