Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120760.seq
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.2  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.6  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 47  EVITKVRLS*NPFAI*IRGFR 109
           E ITK++++ NPFA   +GFR
Sbjct: 184 EKITKLKINYNPFA---KGFR 201


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 541  KKPTNWAEFDLKNLSSLESYETLKIKLALS 630
            K    WA+FD K    + +Y++  IK+ ++
Sbjct: 1870 KPHDTWADFDNKFYEKVTAYKSKGIKVLVA 1899



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 541  KKPTNWAEFDLKNLSSLESYETLKIKLALS 630
            K   +WA+FD +    +  Y+   IK++L+
Sbjct: 1445 KAHDSWADFDNQFYKRVTGYKAKGIKVSLA 1474


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = -2

Query: 683 ISNSGGVISRVLSIAMYLLSANLIFRVS*LS-KLLRFFK--SNSAQFVGFLXLFIAVLQF 513
           IS     +SR L +  Y     L +  +  S KL   FK     A + GFL +  +++ F
Sbjct: 69  ISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMF 128

Query: 512 RYRSN 498
             RSN
Sbjct: 129 YKRSN 133


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = -2

Query: 683 ISNSGGVISRVLSIAMYLLSANLIFRVS*LS-KLLRFFK--SNSAQFVGFLXLFIAVLQF 513
           IS     +SR L +  Y     L +  +  S KL   FK     A + GFL +  +++ F
Sbjct: 25  ISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGYTGFLAMLTSMVMF 84

Query: 512 RYRSN 498
             RSN
Sbjct: 85  YKRSN 89


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 511 RNCKTAMKRXKKPTNWAEFDLKNLSSLESYET 606
           +  K   K  K PT   +F+ ++++S   +ET
Sbjct: 403 KTAKLMAKSMKSPTYALKFEYRSMNSWFEHET 434


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 511 RNCKTAMKRXKKPTNWAEFDLKNLSSLESYET 606
           +  K   K  K PT   +F+ ++++S   +ET
Sbjct: 403 KTAKLMAKSMKSPTYALKFEYRSMNSWFEHET 434


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 511 RNCKTAMKRXKKPTNWAEFDLKNLSSLESYET 606
           +  K   K  K PT   +F+ ++++S   +ET
Sbjct: 403 KTAKLMAKSMKSPTYVLKFEYRSMNSWFEHET 434


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 252 FGCSSNYCFNNYVCSI 299
           + C SN C N  VC I
Sbjct: 378 YDCDSNPCQNGGVCRI 393


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 593 SKLLRFFKSNSAQFVGFLXLFIAVL 519
           +KL+ F+KS +   + F  +FI  +
Sbjct: 68  TKLISFYKSTAILEIAFEVIFIVTV 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,172
Number of Sequences: 336
Number of extensions: 2635
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)