Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120759.seq
         (687 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m...    30   1.3  
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem...    29   2.2  
At1g16410.2 68414.m01962 cytochrome P450, putative similar to gb...    29   3.8  
At1g16410.1 68414.m01963 cytochrome P450, putative similar to gb...    29   3.8  
At2g38770.1 68415.m04760 expressed protein                             28   6.7  
At1g16400.1 68414.m01961 cytochrome P450 family protein similar ...    28   6.7  
At3g58760.1 68416.m06549 ankyrin protein kinase, putative simila...    27   8.8  

>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
           membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
           to SP|O22218 Calcium-transporting ATPase 4, plasma
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
           {Arabidopsis thaliana}
          Length = 1030

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 206 VVLMVCNMSTAAICVCAEGFAGGXXXXXXRVCDMLLPVSISSIS 75
           ++LMVC + +  + V  EGF  G       +  +LL V +++IS
Sbjct: 172 IILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAIS 215


>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA11)
           identical to SP|Q9M2L4|ACAB_ARATH Potential
           calcium-transporting ATPase 11, plasma membrane-type (EC
           3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
           thaliana}; strong similarity to calmodulin-stimulated
           calcium-ATPase [Brassica oleracea] GI:1805654
          Length = 1025

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -2

Query: 206 VVLMVCNMSTAAICVCAEGFAGGXXXXXXRVCDMLLPVSISSIS 75
           ++LMVC + +  + V  EGF  G       +  ++L V +++IS
Sbjct: 172 IILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAIS 215


>At1g16410.2 68414.m01962 cytochrome P450, putative similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family
          Length = 423

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/84 (23%), Positives = 41/84 (48%)
 Frame = +3

Query: 246 YAQKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLDFLGSVYDNTIQVIVTE 425
           Y ++   +K + T  + +   L+ ++A  T      IE  N++ ++ S+Y  +  V V E
Sbjct: 136 YGEQFMKMKRVITTEIMSVKTLKMLEAART------IEADNLIAYVHSMYQRSETVDVRE 189

Query: 426 *VCVVGHDERYRVVFGNKQIAVKN 497
              V G+    R++FG + +  +N
Sbjct: 190 LSRVYGYAVTMRMLFGRRHVTKEN 213


>At1g16410.1 68414.m01963 cytochrome P450, putative similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family
          Length = 538

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/84 (23%), Positives = 41/84 (48%)
 Frame = +3

Query: 246 YAQKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLDFLGSVYDNTIQVIVTE 425
           Y ++   +K + T  + +   L+ ++A  T      IE  N++ ++ S+Y  +  V V E
Sbjct: 136 YGEQFMKMKRVITTEIMSVKTLKMLEAART------IEADNLIAYVHSMYQRSETVDVRE 189

Query: 426 *VCVVGHDERYRVVFGNKQIAVKN 497
              V G+    R++FG + +  +N
Sbjct: 190 LSRVYGYAVTMRMLFGRRHVTKEN 213


>At2g38770.1 68415.m04760 expressed protein
          Length = 1509

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -2

Query: 521  YRQLLGSSIFNRNLFISKYNAIALIVTDDAHLLCNYHLDRVVVNAPQKV*HVDRFDSIQL 342
            Y +LLG    N+   ++ YN   L++ D  +  C   +    +  P KV  VD+F   Q 
Sbjct: 1274 YMRLLGYPA-NKISILTTYNGQKLLIRDVINRRC---VPYPFIGPPSKVTTVDKFQGQQN 1329

Query: 341  NFGLVGLHR 315
            +F L+ L R
Sbjct: 1330 DFILLSLVR 1338


>At1g16400.1 68414.m01961 cytochrome P450 family protein similar to
           gb|AF069494 cytochrome P450 from Sinapis alba and is a
           member of the PF|00067 Cytochrome P450 family; identical
           to cytochrome P450 CYP79F2 (CYP79F2) GI:10946207
          Length = 537

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +3

Query: 354 IETVNVLDFLGSVYDNTIQVIVTE*VCVVGHDERYRVVFGNKQIAVKN 497
           IE  N++ ++ S+Y  +  V V E   V G+    R++FG + +  +N
Sbjct: 165 IEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKEN 212


>At3g58760.1 68416.m06549 ankyrin protein kinase, putative similar
           to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674
          Length = 471

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 345 LNRIETVNVLDFLGSVYDNTIQVIVTE 425
           L +I   NV+ FLG+V  +T  +IVTE
Sbjct: 213 LQKIRHPNVVQFLGAVTQSTPMMIVTE 239


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,047,628
Number of Sequences: 28952
Number of extensions: 270989
Number of successful extensions: 694
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)