Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120756.seq
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0457 + 18076911-18077272,18077356-18077475,18077554-180777...    32   0.50 
09_02_0539 - 10408398-10409552                                         29   4.7  

>10_08_0457 +
           18076911-18077272,18077356-18077475,18077554-18077782,
           18077993-18078652,18079224-18079425,18079521-18079611,
           18079780-18079837
          Length = 573

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 123 FEKQMSHIV*YHIAKQMTSFLDCALQVEFYS*NEFGY 13
           F + MS I   H+ K+MT+F + A QVE  +  EF Y
Sbjct: 129 FNRMMSSIRLLHLRKKMTTFKNIATQVEILTKREFLY 165


>09_02_0539 - 10408398-10409552
          Length = 384

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = -3

Query: 160 FTS-RI-LPVNQVRF*KTNESYCMISYCKTNDI 68
           FTS RI LP +Q RF +TN + C++S CK  DI
Sbjct: 145 FTSQRISLPFDQDRFLRTNYTRCLLS-CKPTDI 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,192,527
Number of Sequences: 37544
Number of extensions: 228697
Number of successful extensions: 229
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)