Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120756.seq
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.                30   9.1  
BC063136-1|AAH63136.1|  538|Homo sapiens NEB protein protein.          30   9.1  
AK056994-1|BAB71337.1|  500|Homo sapiens protein ( Homo sapiens ...    30   9.1  
AF117675-1|AAD20347.1|  977|Homo sapiens nebulin protein.              30   9.1  
AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.              30   9.1  

>X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.
          Length = 6669

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +1

Query: 211  TSRILRVKHDQEMMSEVM---SFVFRN*TGFTSRILRVKRDQEMMSFVFQN*I*EMMSFV 381
            T  + RVKH+QE +S V+   +      T  T  + RVKR+QE +S V      E +   
Sbjct: 6291 TPEMERVKHNQENISSVLYKENVGKATATPVTPEMQRVKRNQENISSVLYK---ENLGKA 6347

Query: 382  FQN*TGFTSRILRVKHNRKVMSFV 453
                T FT  + RVK N++  S V
Sbjct: 6348 TP--TPFTPEMERVKRNQENFSSV 6369


>BC063136-1|AAH63136.1|  538|Homo sapiens NEB protein protein.
          Length = 538

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +1

Query: 211 TSRILRVKHDQEMMSEVM---SFVFRN*TGFTSRILRVKRDQEMMSFVFQN*I*EMMSFV 381
           T  + RVKH+QE +S V+   +      T  T  + RVKR+QE +S V      E +   
Sbjct: 160 TPEMERVKHNQENISSVLYKENVGKATATPVTPEMQRVKRNQENISSVLYK---ENLGKA 216

Query: 382 FQN*TGFTSRILRVKHNRKVMSFV 453
               T FT  + RVK N++  S V
Sbjct: 217 TP--TPFTPEMERVKRNQENFSSV 238


>AK056994-1|BAB71337.1|  500|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32432 fis, clone SKMUS2001157, highly similar to
           Homo sapiens nebulin (NEB) gene. ).
          Length = 500

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +1

Query: 211 TSRILRVKHDQEMMSEVM---SFVFRN*TGFTSRILRVKRDQEMMSFVFQN*I*EMMSFV 381
           T  + RVKH+QE +S V+   +      T  T  + RVKR+QE +S V      E +   
Sbjct: 122 TPEMERVKHNQENISSVLYKENVGKATATPVTPEMQRVKRNQENISSVLYK---ENLGKA 178

Query: 382 FQN*TGFTSRILRVKHNRKVMSFV 453
               T FT  + RVK N++  S V
Sbjct: 179 TP--TPFTPEMERVKRNQENFSSV 200


>AF117675-1|AAD20347.1|  977|Homo sapiens nebulin protein.
          Length = 977

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +1

Query: 211 TSRILRVKHDQEMMSEVM---SFVFRN*TGFTSRILRVKRDQEMMSFVFQN*I*EMMSFV 381
           T  + RVKH+QE +S V+   +      T  T  + RVKR+QE +S V      E +   
Sbjct: 599 TPEMERVKHNQENISSVLYKENVGKATATPVTPEMQRVKRNQENISSVLYK---ENLGKA 655

Query: 382 FQN*TGFTSRILRVKHNRKVMSFV 453
               T FT  + RVK N++  S V
Sbjct: 656 TP--TPFTPEMERVKRNQENFSSV 677


>AC009497-1|AAY14651.1| 2802|Homo sapiens unknown protein.
          Length = 2802

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
 Frame = +1

Query: 211  TSRILRVKHDQEMMSEVM---SFVFRN*TGFTSRILRVKRDQEMMSFVFQN*I*EMMSFV 381
            T  + RVKH+QE +S V+   +      T  T  + RVKR+QE +S V      E +   
Sbjct: 2424 TPEMERVKHNQENISSVLYKENVGKATATPVTPEMQRVKRNQENISSVLYK---ENLGKA 2480

Query: 382  FQN*TGFTSRILRVKHNRKVMSFV 453
                T FT  + RVK N++  S V
Sbjct: 2481 TP--TPFTPEMERVKRNQENFSSV 2502


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,812,684
Number of Sequences: 237096
Number of extensions: 1326502
Number of successful extensions: 1310
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)