Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120754.seq
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX511262-7|CAM45798.1| 245|Homo sapiens HLA-B associated transc... 31 3.9
AL805934-8|CAO03656.1| 245|Homo sapiens HLA-B associated transc... 31 3.9
AL662847-68|CAO72106.1| 245|Homo sapiens HLA-B associated trans... 31 3.9
AL662801-52|CAM25593.1| 245|Homo sapiens HLA-B associated trans... 31 3.9
M33521-1|AAA35588.1| 1132|Homo sapiens protein ( Human HLA-B-ass... 30 6.9
M33519-1|AAA35587.1| 1132|Homo sapiens protein ( Human HLA-B-ass... 30 6.9
BX511262-9|CAM45800.1| 1132|Homo sapiens HLA-B associated transc... 30 6.9
BX511262-8|CAM45799.1| 1126|Homo sapiens HLA-B associated transc... 30 6.9
BC021997-1|AAH21997.1| 619|Homo sapiens zinc finger protein 668... 30 6.9
BC003133-1|AAH03133.1| 1126|Homo sapiens HLA-B associated transc... 30 6.9
BA000025-30|BAB63390.1| 1126|Homo sapiens BAT3 protein. 30 6.9
AL805934-11|CAI18504.1| 1132|Homo sapiens HLA-B associated trans... 30 6.9
AL805934-10|CAI18501.1| 1126|Homo sapiens HLA-B associated trans... 30 6.9
AL670886-2|CAI17785.1| 1132|Homo sapiens HLA-B associated transc... 30 6.9
AL670886-1|CAI17784.1| 1126|Homo sapiens HLA-B associated transc... 30 6.9
AL662847-2|CAI17659.1| 1132|Homo sapiens HLA-B associated transc... 30 6.9
AL662847-1|CAI17658.1| 1126|Homo sapiens HLA-B associated transc... 30 6.9
AL662801-54|CAI18314.1| 1132|Homo sapiens HLA-B associated trans... 30 6.9
AL662801-53|CAI18315.1| 1126|Homo sapiens HLA-B associated trans... 30 6.9
AK027398-1|BAB55084.1| 619|Homo sapiens protein ( Homo sapiens ... 30 6.9
AK023541-1|BAB14602.1| 498|Homo sapiens protein ( Homo sapiens ... 30 6.9
AF129756-16|AAD18085.1| 1229|Homo sapiens BAT3 protein. 30 6.9
AB209710-1|BAD92947.1| 624|Homo sapiens Hypothetical protein FL... 30 6.9
>BX511262-7|CAM45798.1| 245|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 245
Score = 31.1 bits (67), Expect = 3.9
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 110 LMHQATLPCDLGYINPIIKS---PIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPL 268
++ QA +P + + + P P T+HPR+ HQS + V + +G +P
Sbjct: 19 VLQQAAIPIQINVGTTVTMTGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGG 78
Query: 269 SSEAPSAYLTPSSLGMAKGVSLPYF 343
AP+ L P G G +P F
Sbjct: 79 VPSAPTGPLGPPGHGQTLGQQVPGF 103
>AL805934-8|CAO03656.1| 245|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 245
Score = 31.1 bits (67), Expect = 3.9
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 110 LMHQATLPCDLGYINPIIKS---PIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPL 268
++ QA +P + + + P P T+HPR+ HQS + V + +G +P
Sbjct: 19 VLQQAAIPIQINVGTTVTMTGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGG 78
Query: 269 SSEAPSAYLTPSSLGMAKGVSLPYF 343
AP+ L P G G +P F
Sbjct: 79 VPSAPTGPLGPPGHGQTLGQQVPGF 103
>AL662847-68|CAO72106.1| 245|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 245
Score = 31.1 bits (67), Expect = 3.9
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 110 LMHQATLPCDLGYINPIIKS---PIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPL 268
++ QA +P + + + P P T+HPR+ HQS + V + +G +P
Sbjct: 19 VLQQAAIPIQINVGTTVTMTGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGG 78
Query: 269 SSEAPSAYLTPSSLGMAKGVSLPYF 343
AP+ L P G G +P F
Sbjct: 79 VPSAPTGPLGPPGHGQTLGQQVPGF 103
>AL662801-52|CAM25593.1| 245|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 245
Score = 31.1 bits (67), Expect = 3.9
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 110 LMHQATLPCDLGYINPIIKS---PIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPL 268
++ QA +P + + + P P T+HPR+ HQS + V + +G +P
Sbjct: 19 VLQQAAIPIQINVGTTVTMTGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGG 78
Query: 269 SSEAPSAYLTPSSLGMAKGVSLPYF 343
AP+ L P G G +P F
Sbjct: 79 VPSAPTGPLGPPGHGQTLGQQVPGF 103
>M33521-1|AAA35588.1| 1132|Homo sapiens protein ( Human
HLA-B-associated transcript 3 (BAT3) gene, 3' end. ).
Length = 1132
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 433 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 492
Query: 335 PYF 343
P F
Sbjct: 493 PGF 495
>M33519-1|AAA35587.1| 1132|Homo sapiens protein ( Human
HLA-B-associated transcript 3 (BAT3) mRNA, complete cds.
).
Length = 1132
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 433 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 492
Query: 335 PYF 343
P F
Sbjct: 493 PGF 495
>BX511262-9|CAM45800.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 433 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 492
Query: 335 PYF 343
P F
Sbjct: 493 PGF 495
>BX511262-8|CAM45799.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 427 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
Query: 335 PYF 343
P F
Sbjct: 487 PGF 489
>BC021997-1|AAH21997.1| 619|Homo sapiens zinc finger protein 668
protein.
Length = 619
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 237 KEFAPG*SLRCHQRLHQRISPPRHWAWLKGFRSL 338
K F+ SL CHQR+H P R A KGF L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264
>BC003133-1|AAH03133.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 427 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
Query: 335 PYF 343
P F
Sbjct: 487 PGF 489
>BA000025-30|BAB63390.1| 1126|Homo sapiens BAT3 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 427 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
Query: 335 PYF 343
P F
Sbjct: 487 PGF 489
>AL805934-11|CAI18504.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 433 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 492
Query: 335 PYF 343
P F
Sbjct: 493 PGF 495
>AL805934-10|CAI18501.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 427 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
Query: 335 PYF 343
P F
Sbjct: 487 PGF 489
>AL670886-2|CAI17785.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 433 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 492
Query: 335 PYF 343
P F
Sbjct: 493 PGF 495
>AL670886-1|CAI17784.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 427 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
Query: 335 PYF 343
P F
Sbjct: 487 PGF 489
>AL662847-2|CAI17659.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 433 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 492
Query: 335 PYF 343
P F
Sbjct: 493 PGF 495
>AL662847-1|CAI17658.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 427 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
Query: 335 PYF 343
P F
Sbjct: 487 PGF 489
>AL662801-54|CAI18314.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 433 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 492
Query: 335 PYF 343
P F
Sbjct: 493 PGF 495
>AL662801-53|CAI18315.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 427 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 486
Query: 335 PYF 343
P F
Sbjct: 487 PGF 489
>AK027398-1|BAB55084.1| 619|Homo sapiens protein ( Homo sapiens
cDNA FLJ14492 fis, clone MAMMA1002937, weakly similar to
ZINC FINGER PROTEIN 135. ).
Length = 619
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 237 KEFAPG*SLRCHQRLHQRISPPRHWAWLKGFRSL 338
K F+ SL CHQR+H P R A KGF L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264
>AK023541-1|BAB14602.1| 498|Homo sapiens protein ( Homo sapiens
cDNA FLJ13479 fis, clone PLACE1003738, weakly similar to
ZINC FINGER PROTEIN 135. ).
Length = 498
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 237 KEFAPG*SLRCHQRLHQRISPPRHWAWLKGFRSL 338
K F+ SL CHQR+H P R A KGF L
Sbjct: 110 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 143
>AF129756-16|AAD18085.1| 1229|Homo sapiens BAT3 protein.
Length = 1229
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 167 SPIPXTNHPRLNIHFHQSADAV----LEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSL 334
+P P T+HPR+ HQS + V + +G +P AP+ L P G G +
Sbjct: 530 APPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQV 589
Query: 335 PYF 343
P F
Sbjct: 590 PGF 592
>AB209710-1|BAD92947.1| 624|Homo sapiens Hypothetical protein
FLJ14492 variant protein.
Length = 624
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 237 KEFAPG*SLRCHQRLHQRISPPRHWAWLKGFRSL 338
K F+ SL CHQR+H P R A KGF L
Sbjct: 236 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,137,969
Number of Sequences: 237096
Number of extensions: 2134719
Number of successful extensions: 9182
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9182
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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