Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120754.seq
(695 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 0.69
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 0.69
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 2.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 8.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 8.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 8.5
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.69
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 299 PSSLGMAKGVSLPYFQVNDESQASRLIS 382
P+S+G++ VSLP F+V Q + IS
Sbjct: 174 PNSVGVSNEVSLPQFKVLGHRQRAMEIS 201
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 25.0 bits (52), Expect = 0.69
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 299 PSSLGMAKGVSLPYFQVNDESQASRLIS 382
P+S+G++ VSLP F+V Q + IS
Sbjct: 113 PNSVGVSNEVSLPQFKVLGHRQRAMEIS 140
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 576 YFSTPPFDTVLYDNIRTVRKDNKTALL 656
+F P D LYD +R +KD + ++
Sbjct: 37 FFDLLPEDPKLYDKMRPPKKDGQATVV 63
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 206 HFHQSADAVLEGVRAGVKPPLSSEAPSAYLTPSSL 310
H ++ +L+G AGV+P +S P A + SL
Sbjct: 5 HEYRLTKYLLDGYDAGVRPAENSSQPLAVVFGLSL 39
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHDFQH 226
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 196 SKKYATSSNSLRSRTHGFQH 215
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 103 SRPYASSYPPLRSRLHQPDH 162
S+ YA+S LRSR H H
Sbjct: 207 SKKYATSSNSLRSRTHGFQH 226
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,040
Number of Sequences: 438
Number of extensions: 3862
Number of successful extensions: 27
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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