Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120747.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   1.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   9.5  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 165 CR*VYKNETCQMQQSSNGHRNCK 233
           C+  +K +TC ++ S   H  CK
Sbjct: 132 CKNGWKGKTCSLKDSHCDHTTCK 154


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 595 SVDGAQQHPLVFCKQNG 545
           +VDG Q+HPL     NG
Sbjct: 146 NVDGCQKHPLCNDDPNG 162


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 467 PSTCY*FY*QNGVCVTETNDTSIPGEPILFTENEG 571
           P+ CY      G+    TN+  +  E +LF E  G
Sbjct: 321 PNICYKLLSNLGIFPKTTNEQLLRKELLLFAEQMG 355


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 574 HPLVFCKQNGFSGNACVISFS 512
           HP V     G+SG+ C   F+
Sbjct: 119 HPQVLLSPGGYSGSLCDQGFA 139


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 470 MESIVYKS*CAKHHGGNLPSVCFVSKY 390
           ++ + Y   C K      PSV F+S+Y
Sbjct: 41  LQELKYTKRCIKETLRLFPSVPFISRY 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,119
Number of Sequences: 336
Number of extensions: 3219
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)