Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120746.seq
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 120 4e-26
UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep: B... 112 7e-24
UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa ... 111 2e-23
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 109 5e-23
UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodei... 99 1e-19
UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20... 78 2e-13
UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified Nucleopolyhedr... 71 3e-11
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 70 6e-11
UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing... 67 4e-10
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re... 64 4e-09
UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear p... 63 7e-09
UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascoviru... 51 2e-05
UniRef50_O10320 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q9E231 Cluster: Orf60-like protien; n=14; Baculoviridae... 42 0.019
UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum granulovir... 40 0.076
UniRef50_Q6VZI7 Cluster: CNPV160 N1R/p28-like protein; n=11; Avi... 40 0.076
UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.13
UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6; Nucleo... 38 0.23
UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep: B... 37 0.54
UniRef50_Q89KW2 Cluster: Bll4788 protein; n=7; Bradyrhizobiaceae... 37 0.54
UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;... 37 0.54
UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum ... 36 0.71
UniRef50_Q2GQT5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.94
UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;... 36 1.2
UniRef50_Q6VZC0 Cluster: CNPV227 N1R/p28-like protein; n=3; Cana... 35 1.6
UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura granulovi... 35 1.6
UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein; ... 35 1.6
UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3; B... 35 2.2
UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin008... 34 2.9
UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2; ... 34 3.8
UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q6VZH8 Cluster: CNPV169 N1R/p28-like protein; n=2; Cana... 33 5.0
UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faec... 33 5.0
UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococc... 33 5.0
UniRef50_Q9TM34 Cluster: DNA-directed RNA polymerase subunit bet... 33 5.0
UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;... 33 6.6
UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovir... 33 6.6
UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis va... 33 6.6
UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2; ... 33 8.8
UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas aro... 33 8.8
UniRef50_A5V9T8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1; H... 33 8.8
UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium ther... 33 8.8
UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridiu... 33 8.8
UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing... 33 8.8
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 120 bits (288), Expect = 4e-26
Identities = 57/95 (60%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Frame = +2
Query: 233 QRNDCXSSDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNE 412
Q +D + AR+D E ARR+ L+ R+ADIAQDVI KPSNPQL H+LAVC++GNNE
Sbjct: 173 QNSDAMIQEMIVARRDAETARRDMVVLSTRIADIAQDVITKPSNPQLLHTLAVCEIGNNE 232
Query: 413 FAFLRPQKRSLGRS---LKRLGSNDVIFSSDYVPN 508
FAFLRPQKRSL RS L+R G D+++++DYVPN
Sbjct: 233 FAFLRPQKRSLQRSLNNLRRNGQADLVYANDYVPN 267
Score = 69.3 bits (162), Expect = 8e-11
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
GVIQLIMKSKLPYA+ELQEWLLEEVIPQVLCT +
Sbjct: 109 GVIQLIMKSKLPYAVELQEWLLEEVIPQVLCTGK 142
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/38 (60%), Positives = 35/38 (92%)
Frame = +1
Query: 511 MNVLNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVI 624
MNVLNKVKE +P++KFKAK+N+ITLL++Y +++L+ +I
Sbjct: 269 MNVLNKVKEHVPKDKFKAKNNKITLLKEYDKQKLIEII 306
>UniRef50_Q8QLL0 Cluster: BRO-b; n=2; Nucleopolyhedrovirus|Rep:
BRO-b - Mamestra configurata NPV-A
Length = 372
Score = 112 bits (270), Expect = 7e-24
Identities = 52/75 (69%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
Frame = +2
Query: 290 ARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLG 469
AR++TA+LANRMADIAQDVIAKP+NPQL HSLAVC +G +++AF+RPQKRSL RSL RL
Sbjct: 243 ARKDTAELANRMADIAQDVIAKPANPQLLHSLAVCSMGGDQYAFVRPQKRSLKRSLDRLA 302
Query: 470 --SNDVIFSSDYVPN 508
D+++ SDYVPN
Sbjct: 303 VEERDIVYKSDYVPN 317
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/38 (68%), Positives = 35/38 (92%)
Frame = +1
Query: 511 MNVLNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVI 624
+NVLNKVKEA+P++KF A+HN+ITLL D T+EEL++VI
Sbjct: 319 VNVLNKVKEALPKDKFTARHNKITLLNDMTKEELVDVI 356
>UniRef50_Q99GY7 Cluster: Bro; n=27; root|Rep: Bro - Helicoverpa
armigera nucleopolyhedrovirus G4
Length = 527
Score = 111 bits (267), Expect = 2e-23
Identities = 52/76 (68%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
Frame = +2
Query: 287 NARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRL 466
+AR+ETA++A RMADIAQDVIAKPS+PQL HSLAVC +G +++AFLRPQKRSL RSL RL
Sbjct: 383 DARKETAEIAKRMADIAQDVIAKPSDPQLLHSLAVCSMGGDQYAFLRPQKRSLKRSLDRL 442
Query: 467 G--SNDVIFSSDYVPN 508
D+++ SDYVPN
Sbjct: 443 SVDEKDIVYKSDYVPN 458
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +1
Query: 511 MNVLNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVI 624
MNVLNKVKE +P+ K+KA+HNRITL ED TRE+L+ I
Sbjct: 460 MNVLNKVKERLPKEKYKARHNRITLHEDLTREDLLQAI 497
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 109 bits (263), Expect = 5e-23
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Frame = +2
Query: 251 SSDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRP 430
+++ A Q+ A + +ANRMADIAQDVIAKPS+PQL HSLAVC +G +++AFLRP
Sbjct: 189 NNNLNVANQNLHEANQTIGHMANRMADIAQDVIAKPSDPQLLHSLAVCSLGGDQYAFLRP 248
Query: 431 QKRSLGRSLKRLG--SNDVIFSSDYVPN 508
QKRSL RSL RL D++F SDYVPN
Sbjct: 249 QKRSLQRSLNRLSVDERDIVFKSDYVPN 276
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
GVIQLIMKSKLPYA+ELQ WLLEEVIPQVLCT +
Sbjct: 93 GVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGK 126
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +1
Query: 511 MNVLNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVI 624
+NVLNKVKE +PR+KFKAKHN+ITLL++ TRE+L+ +
Sbjct: 278 VNVLNKVKETLPRDKFKAKHNKITLLDNLTREQLVEAV 315
>UniRef50_Q4KT25 Cluster: BRO-A; n=3; root|Rep: BRO-A - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 517
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +2
Query: 290 ARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLG 469
A LANRMADIAQDVIAKPS+PQL HSLAVC +G ++AF+RPQKRSL RSL RL
Sbjct: 384 ANERIENLANRMADIAQDVIAKPSDPQLLHSLAVCALGEGQYAFVRPQKRSLKRSLDRLS 443
Query: 470 --SNDVIFSSDYVPN 508
+ ++F S+YVPN
Sbjct: 444 IDESQILFKSNYVPN 458
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = +1
Query: 511 MNVLNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVI 624
MNVLNKVKE++P++KF A+HN+ITLLED TRE+L+ I
Sbjct: 460 MNVLNKVKESLPKDKFTARHNKITLLEDLTREDLVEAI 497
>UniRef50_O55569 Cluster: P20; n=5; Nucleopolyhedrovirus|Rep: P20 -
Leucania separata nuclear polyhedrosis virus (LsNPV)
Length = 179
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Frame = +2
Query: 290 ARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLG 469
A + L+ R+ DI QDV+ KP N QL H+LAVC++ N+FAFLR Q RSL RS+KRL
Sbjct: 56 ANSQCMSLSKRLVDIVQDVVVKPQNCQLLHALAVCELSCNKFAFLRTQLRSLKRSIKRLQ 115
Query: 470 SND-----VIFSSDYVPN 508
+ +I+ S+YVPN
Sbjct: 116 RAEQHEPTIIYQSEYVPN 133
Score = 46.0 bits (104), Expect = 9e-04
Identities = 16/38 (42%), Positives = 31/38 (81%)
Frame = +1
Query: 511 MNVLNKVKEAIPRNKFKAKHNRITLLEDYTREELMNVI 624
+N+LNK+KE +P++KF A+HN+I L++D ++ L+ ++
Sbjct: 135 INILNKIKEQLPKDKFTARHNKIQLVDDCGKDTLVKLL 172
>UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified
Nucleopolyhedrovirus|Rep: BRO-D - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 336
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQVRAGR*NG 134
GVIQLIMKSKLPYA+ELQEWLLEEVIPQVLCT + + NG
Sbjct: 104 GVIQLIMKSKLPYAVELQEWLLEEVIPQVLCTGKYQPAVDNG 145
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT +
Sbjct: 94 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGK 127
>UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing
protein J; n=1; Lymantria dispar MNPV|Rep:
Uncharacterized Bro-N domain-containing protein J -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 403
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
GVIQLIMKSKLPYA+ELQ WLLEEVIPQVLCT +
Sbjct: 94 GVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGK 127
>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
BRO - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 334
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
GVIQLIMKSKL YA+ELQEW+ EEVIPQVLCT +
Sbjct: 102 GVIQLIMKSKLSYAVELQEWMFEEVIPQVLCTGK 135
>UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-e - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 354
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
GVIQLIM SKLPYA+ELQEWLLEEVIPQVL T +
Sbjct: 116 GVIQLIMHSKLPYAVELQEWLLEEVIPQVLSTGR 149
>UniRef50_A4KX99 Cluster: Bro6; n=1; Heliothis virescens ascovirus
3e|Rep: Bro6 - Heliothis virescens ascovirus 3e
Length = 153
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 278 DCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCD-VGNNEFAFLRPQKRSL 445
D +ARR+T +LANR+ADI Q V+AKPS + HSL + + + + A R QKRS+
Sbjct: 74 DLVSARRDTVKLANRIADITQAVVAKPSVEECLHSLVMHSMISSRDTATNRSQKRSI 130
>UniRef50_O10320 Cluster: Putative uncharacterized protein; n=1;
Orgyia pseudotsugata MNPV|Rep: Putative uncharacterized
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 60
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -3
Query: 465 NRFRLRPSDRFCGRRNANSLLPTSHTARLWHSCG 364
N F+LR S+RFCGR NANSLLP++HTA + G
Sbjct: 8 NLFKLRRSERFCGRTNANSLLPSAHTASACSTAG 41
>UniRef50_Q9E231 Cluster: Orf60-like protien; n=14;
Baculoviridae|Rep: Orf60-like protien - Helicoverpa zea
SNPV
Length = 501
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
G+ LIM+SKLP A E Q WL EEV+P++ T +
Sbjct: 91 GIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGK 124
>UniRef50_Q9PYR4 Cluster: ORF131; n=1; Xestia c-nigrum
granulovirus|Rep: ORF131 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 442
Score = 39.5 bits (88), Expect = 0.076
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
GV LI+KSKLP A + Q+WL EEV+P++ T +
Sbjct: 74 GVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGK 107
>UniRef50_Q6VZI7 Cluster: CNPV160 N1R/p28-like protein; n=11;
Avipoxvirus|Rep: CNPV160 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 396
Score = 39.5 bits (88), Expect = 0.076
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +2
Query: 284 ENARRETAQLANRMADIAQ---DVIAKPSNPQLCHSLAVCDVGN--NEFAFLRPQKRSLG 448
E R+T +L + I + D + PS+P H L + N N F LR Q + L
Sbjct: 265 EKYDRDTLELKTELKKIEERLKDKVINPSSPDKLHRLVILQKKNDSNSFRTLRVQAKGLD 324
Query: 449 RSLKRLGSNDVIFSSDYVPNP*TC 520
R L ++ + +F + Y PN +C
Sbjct: 325 RELDKVKRDYRVFFNAYEPNAVSC 348
>UniRef50_A7LYR8 Cluster: Putative uncharacterized protein; n=2;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 269
Score = 38.7 bits (86), Expect = 0.13
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 12 VIQLIMKSKLPYAIELQEWLLEEVIPQV 95
VI+LIM+SKLP A Q+W+ EE++P +
Sbjct: 83 VIRLIMRSKLPQAEAFQDWVCEEILPSI 110
>UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6;
Nucleopolyhedrovirus|Rep: Baculovirus repeated ORF-a -
Anticarsia gemmatalis nuclear polyhedrosis virus
(AgMNPV)
Length = 243
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVL 98
GV+QLI +SK+P A E Q+W + V+P L
Sbjct: 87 GVLQLISRSKMPNAAEFQDWFYDHVLPACL 116
>UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep:
BRO-g - Mamestra configurata NPV-A
Length = 235
Score = 36.7 bits (81), Expect = 0.54
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQV 95
G++Q+I K KL A +LQ+WL EEV P++
Sbjct: 91 GLVQMITKCKLKNADKLQKWLYEEVFPKI 119
>UniRef50_Q89KW2 Cluster: Bll4788 protein; n=7;
Bradyrhizobiaceae|Rep: Bll4788 protein - Bradyrhizobium
japonicum
Length = 332
Score = 36.7 bits (81), Expect = 0.54
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 287 NARRETAQLANRMADIAQDVIAKPSNPQLCHS---LAVCDVGNNEFAFLRPQKRSLGRSL 457
NA ++ A A A + + ++ P NPQL ++ L + D GN A L P K ++GR+L
Sbjct: 72 NAPKDEALAAGEAAYMPKGMVTVPFNPQLINTGSKLVLIDAGNGA-ANLEPSKGAVGRTL 130
Query: 458 KRLGSNDV 481
+ L + V
Sbjct: 131 QNLAAAGV 138
>UniRef50_A3HNE6 Cluster: BRO domain protein domain protein; n=1;
Pseudomonas putida GB-1|Rep: BRO domain protein domain
protein - Pseudomonas putida (strain GB-1)
Length = 285
Score = 36.7 bits (81), Expect = 0.54
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +3
Query: 6 RGVIQLIMKSKLPYAIELQEWLLEEVIPQV 95
R V +L+M+SK+P A +EW++ EV+P +
Sbjct: 93 RDVYRLVMRSKMPQAERFEEWVVSEVLPSI 122
>UniRef50_A4TYQ8 Cluster: BRO, N-terminal; n=1; Magnetospirillum
gryphiswaldense|Rep: BRO, N-terminal - Magnetospirillum
gryphiswaldense
Length = 300
Score = 36.3 bits (80), Expect = 0.71
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 12 VIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 104
V++LI+ SKLP A+ + W+ EEV+P + T
Sbjct: 74 VLRLIVGSKLPAAVRFERWVFEEVLPTIRTT 104
>UniRef50_Q2GQT5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 129
Score = 35.9 bits (79), Expect = 0.94
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = +2
Query: 224 FVCQRNDCXSSDAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVG 403
+ +RNDC + A+T R NA +L + + + + + P+ A G
Sbjct: 46 YYSRRNDCLTIQAQTQRSRSANADENHQKLFEEIQSLYRRTVPGETRPEKAKKYAALKKG 105
Query: 404 NNEFAFLRPQKRSLGRSLKRLGSND 478
NE + +SL +S +R GS D
Sbjct: 106 ANEARMKSKKLQSLKKSSRR-GSQD 129
>UniRef50_A1AN22 Cluster: BRO domain protein domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: BRO domain protein
domain protein - Pelobacter propionicus (strain DSM
2379)
Length = 247
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 6 RGVIQLIMKSKLPYAIELQEWLLEEVIPQV 95
R + +LIM+SKLP A +EW++ EV+P +
Sbjct: 72 RDLYRLIMRSKLPAAERFEEWVVAEVLPAI 101
>UniRef50_Q6VZC0 Cluster: CNPV227 N1R/p28-like protein; n=3;
Canarypox virus|Rep: CNPV227 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 359
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +2
Query: 284 ENARRETAQLANRMADIAQ---DVIAKPSNPQLCHSLAVCDVGN--NEFAFLRPQKRSLG 448
E R+T +L + I + D + PS+P H L + N F LR Q L
Sbjct: 228 EKYDRDTHELKTELKKIEERLKDKVINPSSPNKLHRLVILQNKRDPNSFKTLRLQAERLD 287
Query: 449 RSLKRLGSNDVIFSSDYVPNP*TC 520
R L ++ + +F + Y PN +C
Sbjct: 288 RELDKVKRDYKVFFNAYEPNAVSC 311
>UniRef50_A5IZQ5 Cluster: Bro-2; n=1; Spodoptera litura
granulovirus|Rep: Bro-2 - Spodoptera litura
granulovirus
Length = 368
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 27 MKSKLPYAIELQEWLLEEVIPQV 95
M+SKLP A E Q WL EEV+P++
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPEL 23
>UniRef50_Q03FD4 Cluster: Uncharacterized phage-encoded protein;
n=3; root|Rep: Uncharacterized phage-encoded protein -
Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
Length = 267
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQV 95
G+ QL +SKLP A Q+W+ EEV+P +
Sbjct: 73 GIYQLAGQSKLPTAEPFQDWIYEEVLPSI 101
>UniRef50_A0RLT8 Cluster: Antirepressor, phage associated; n=3;
Bacillus cereus group|Rep: Antirepressor, phage
associated - Bacillus thuringiensis (strain Al Hakam)
Length = 262
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 18 QLIMKSKLPYAIELQEWLLEEVIPQV 95
+LI+KSKLP A + + W+ EEV+P +
Sbjct: 83 RLIVKSKLPQAEQFETWVFEEVLPSI 108
>UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin0080
protein - Listeria innocua
Length = 257
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQV 95
G+ QLI KSKL A Q+W+ EV+P V
Sbjct: 73 GLYQLIFKSKLESAERFQDWVTSEVLPSV 101
>UniRef50_Q0I4I5 Cluster: Putative uncharacterized protein; n=2;
Histophilus somni|Rep: Putative uncharacterized protein
- Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 204
Score = 33.9 bits (74), Expect = 3.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 18 QLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
++I KS+ A+E Q W+ EEV+PQ+ T +
Sbjct: 76 RIIFKSRKAEAVEFQNWVFEEVLPQIRKTGK 106
>UniRef50_A7A2N3 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 263
Score = 33.9 bits (74), Expect = 3.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQV 95
G+ +LIM+S+ P A E Q W+ EV+P +
Sbjct: 75 GLYKLIMRSRKPEAKEFQRWVTHEVLPSI 103
>UniRef50_Q6VZH8 Cluster: CNPV169 N1R/p28-like protein; n=2;
Canarypox virus|Rep: CNPV169 N1R/p28-like protein -
Canarypox virus (CNPV)
Length = 332
Score = 33.5 bits (73), Expect = 5.0
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 296 RETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGN--NEFAFLRPQKRSLGRSLKRLG 469
RE ++ + +D + P++P H L + N F LR Q L R L ++
Sbjct: 208 REVKTELKKLEERLKDKVINPTSPNKLHRLVILQNKRDPNSFKTLRLQAERLDRELDKVK 267
Query: 470 SNDVIFSSDYVPNP*TC 520
+ +F + Y PN +C
Sbjct: 268 RDYRVFFNAYEPNAVSC 284
>UniRef50_Q3Y2L0 Cluster: BRO, N-terminal; n=1; Enterococcus faecium
DO|Rep: BRO, N-terminal - Enterococcus faecium DO
Length = 248
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 12 VIQLIMKSKLPYAIELQEWLLEEVIPQV 95
V +LI+KS LP A + + W++EEV+P +
Sbjct: 73 VYRLIIKSNLPSAEKFEAWVMEEVLPTI 100
>UniRef50_Q7Y4K9 Cluster: Gp15; n=9; root|Rep: Gp15 - Streptococcus
phage SM1
Length = 239
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQV 95
G+ LI+ SKLP A E + W+ EV+P +
Sbjct: 71 GLYSLILSSKLPQAREFKRWVTSEVLPAI 99
>UniRef50_Q9TM34 Cluster: DNA-directed RNA polymerase subunit
beta''; n=1; Cyanidium caldarium|Rep: DNA-directed RNA
polymerase subunit beta'' - Cyanidium caldarium
Length = 1269
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 299 ETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSL 457
++ L R+ D+AQD+I + + + + + ++ NNE + KR +GR L
Sbjct: 204 DSGYLTRRLVDVAQDIIVREIDCKTNNGITFSNIQNNEKIIIPLYKRLIGRIL 256
>UniRef50_UPI0000397D5D Cluster: COG3617: Prophage antirepressor;
n=1; Actinobacillus pleuropneumoniae serovar 1 str.
4074|Rep: COG3617: Prophage antirepressor -
Actinobacillus pleuropneumoniae serovar 1 str. 4074
Length = 215
Score = 33.1 bits (72), Expect = 6.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 18 QLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
++I +S AI+ Q W+ EEV+PQ+ T Q
Sbjct: 22 RIIFRSNKSQAIDFQNWVFEEVLPQIRKTGQ 52
>UniRef50_A4KXK3 Cluster: Bro17; n=2; Heliothis virescens ascovirus
3e|Rep: Bro17 - Heliothis virescens ascovirus 3e
Length = 502
Score = 33.1 bits (72), Expect = 6.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 12 VIQLIMKSKLPYAIELQEWLLEEVIPQV 95
+ +L KS LP A E Q+W+ EEV+P +
Sbjct: 94 IYKLCTKSTLPEAEEFQDWIYEEVLPTI 121
>UniRef50_A6PK75 Cluster: BRO domain protein; n=1; Victivallis
vadensis ATCC BAA-548|Rep: BRO domain protein -
Victivallis vadensis ATCC BAA-548
Length = 357
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 12 VIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQVRA 119
V++LI SKLP A + + W+ EEV+P + T A
Sbjct: 76 VMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYAA 111
>UniRef50_Q7N339 Cluster: Similar to bacteriophage protein; n=2;
Enterobacteriaceae|Rep: Similar to bacteriophage protein
- Photorhabdus luminescens subsp. laumondii
Length = 314
Score = 32.7 bits (71), Expect = 8.8
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 12 VIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 104
+ +L+M+S LP A Q+W+ E V+P ++ T
Sbjct: 146 MFRLVMRSNLPSAERFQDWVCEAVLPSIMET 176
>UniRef50_Q47HX8 Cluster: BRO, N-terminal; n=1; Dechloromonas
aromatica RCB|Rep: BRO, N-terminal - Dechloromonas
aromatica (strain RCB)
Length = 111
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQVRAG 122
G+ +LIM+S P A Q+W+ +EV+P + T G
Sbjct: 63 GLYKLIMRSDKPQAKAFQDWVTKEVLPSIRKTGSFVTG 100
>UniRef50_A5V9T8 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas wittichii RW1|Rep: Putative uncharacterized
protein - Sphingomonas wittichii RW1
Length = 261
Score = 32.7 bits (71), Expect = 8.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 329 PPCGWPAAPFRGARFRNLAEPFQRR 255
PPCGW +PFRG +++A RR
Sbjct: 42 PPCGWSPSPFRGGSQKDMAMTDARR 66
>UniRef50_A4P0J2 Cluster: Possible prophage antirepressor; n=1;
Haemophilus influenzae 22.4-21|Rep: Possible prophage
antirepressor - Haemophilus influenzae 22.4-21
Length = 210
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 18 QLIMKSKLPYAIELQEWLLEEVIPQVLCTAQ 110
++I +S AIE Q W+ EEV+PQ+ T +
Sbjct: 76 RIIFRSNKAEAIEFQNWIFEEVLPQIRKTGK 106
>UniRef50_A3DG82 Cluster: BRO-like protein; n=1; Clostridium
thermocellum ATCC 27405|Rep: BRO-like protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 254
Score = 32.7 bits (71), Expect = 8.8
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 18 QLIMKSKLPYAIELQEWLLEEVIPQV 95
+LI+KSKLP A + W+ +EV+P +
Sbjct: 75 RLIVKSKLPKAERFERWVFDEVLPSI 100
>UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridium
phage phiC2|Rep: Putative antirepressor - Clostridium
phage phiC2
Length = 212
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 12 VIQLIMKSKLPYAIELQEWLLEEVIPQVLCTAQVRA 119
V +LI+ S LP A + + W+ +EV+P + T Q +A
Sbjct: 72 VYRLIVGSNLPNAEKFESWVFDEVLPTIRQTGQYQA 107
>UniRef50_Q5UP77 Cluster: Uncharacterized Bro-N domain-containing
protein L2; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Uncharacterized Bro-N domain-containing protein L2 -
Mimivirus
Length = 246
Score = 32.7 bits (71), Expect = 8.8
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +3
Query: 9 GVIQLIMKSKLPYAIELQEWLLEEVIPQVL 98
G LI SK P+A+++++WL +EVIP ++
Sbjct: 182 GFCNLIHHSKKPFAMKIKKWLDDEVIPALI 211
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,403,956
Number of Sequences: 1657284
Number of extensions: 12118249
Number of successful extensions: 37037
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 35763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37016
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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