Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120746.seq
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   0.98 
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       24   4.0  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   5.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.2  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   5.2  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   6.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.1  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   9.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.1  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = +2

Query: 257  DAETARQDCENARRETAQLANRMADIAQDVIAKPSNPQLCHSLAVCDVGNNEFAFLRPQK 436
            DAE+  + CE A+R TA L     D  +  +A   N Q    +A  +    E    R  +
Sbjct: 989  DAESWSRICEAAKRITASLQQAWDD-ERAALAAHGNEQHFEEVADLEARRAEIRRARNDR 1047

Query: 437  RSLGRSLKR 463
            R+  R   R
Sbjct: 1048 RNASRRAAR 1056


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 489 LKMTSLEPNRFRLRPSDRFC 430
           + +TSL    F LRPS+R C
Sbjct: 1   MSVTSLVDGEFLLRPSNRAC 20


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 425 RPQKRSLGRSLKRLGSNDVIFSSDYVPN 508
           + Q +   R LK+LGSN + F+ +  PN
Sbjct: 95  KEQTKLQERLLKKLGSNAIPFTFNISPN 122


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 311 LANRMADIAQDVIAKPSNPQ 370
           L NR+ DI+++  A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 425 RPQKRSLGRSLKRLGSNDVIFSSDYVPN 508
           + Q +   R LK+LGSN + F+ +  PN
Sbjct: 95  KEQTKLQERLLKKLGSNAIPFTFNISPN 122


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 516 RAKQSKGSHTAQQVQSQAQPHH 581
           +A     ++++    SQAQPHH
Sbjct: 335 QANSGSSNNSSSHSHSQAQPHH 356


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 257  DAETARQDCENARRETAQL 313
            DA++  + CE A+R TAQL
Sbjct: 1052 DADSWSRICEGAKRITAQL 1070


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 555 VQSQAQPHHVAGRLHARGANERDRLPL*XDRQIARMNSFAQ 677
           V+ +  P    G+L   G  E D L +  D    R+N F Q
Sbjct: 292 VREKTDPKQTLGKLGYGGVFEIDDLHVFHDSGRTRLNGFIQ 332


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
 Frame = +3

Query: 507 THERAKQSKGSHTAQQVQSQAQPHHVAGR------LHARGANERDRLPL*XDRQIARMNS 668
           TH + +Q   SH  Q  Q  +  H    R      + +   +ERD L    DR+I+ + +
Sbjct: 252 THHQQQQHPSSHQQQSQQHPSSQHQQPSRSASIDLMQSALVDERDYLAA-EDREISTVEN 310

Query: 669 FAQRQ 683
             +R+
Sbjct: 311 KKKRK 315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,384
Number of Sequences: 2352
Number of extensions: 13504
Number of successful extensions: 35
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)