Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120746.seq
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.4  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 338 AQCPPCGWPAAPFRGARFRN 279
           A   PC W A P++G    N
Sbjct: 296 ANTKPCTWAARPWQGYMTNN 315


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 338 AQCPPCGWPAAPFRGARFRN 279
           A   PC W A P++G    N
Sbjct: 296 ANTKPCTWAARPWQGYMTNN 315


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 338 AQCPPCGWPAAPFRGARFRN 279
           A   PC W A P++G    N
Sbjct: 296 ANTKPCTWAARPWQGYMTNN 315


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +3

Query: 525 QSKGSHTAQQVQSQAQPHH 581
           Q +  H AQ +    Q HH
Sbjct: 793 QQRHQHAAQMIYGHQQSHH 811


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,975
Number of Sequences: 438
Number of extensions: 3492
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)