Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120744.seq
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    25   2.3  
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    25   2.3  
AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical prote...    25   3.0  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   3.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   6.9  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   6.9  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    23   9.1  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    23   9.1  

>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +2

Query: 65  FPTLEKRHSPRGSAKKKHLLWCAXLLGSDSFLYCCNFSD----FFGGFVTPRSR 214
           +P L +R   RG  ++ H ++     G D      +  D    F GG+ TPR R
Sbjct: 10  YPELVRRTQGRGRPRQDHPIYTLSHPGGDGIETDGDIDDTLSEFAGGWYTPRLR 63


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 503 ALVCCIVLMASNNCSANLSNMSVKSGNE 586
           ALVCC   +   NC  ++  + +  GN+
Sbjct: 79  ALVCCPAFVNEPNCGPSVFGVRIIGGND 106


>AF457560-1|AAL68790.1|   56|Anopheles gambiae hypothetical protein
           13 protein.
          Length = 56

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 LVALVCCIVLMASNNCSANLSNMSV 571
           LV LVCC+V +  N    N+   S+
Sbjct: 10  LVVLVCCLVSVQGNEIIQNVVKRSI 34


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 194 NPQKSLKSCSSTRNYRCRANXRTTAD 117
           +P   L S +S+ NY CR+N    +D
Sbjct: 536 SPTTILTSVNSSGNYMCRSNPPAQSD 561


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 185 KSLKSCSSTRNYRCRANXRTTADVSSLQNH 96
           + LK+ S  R ++C    R    ++SLQNH
Sbjct: 144 RHLKTHSEDRPHKCVVCERGFKTLASLQNH 173


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 526 QHDAANQRNELNNTNSILTN 467
           QH A  QRN  NN N+I+T+
Sbjct: 206 QHRA--QRNRTNNNNTIITD 223


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 524 TRCSKPAQRVEQHQLYFDQFSVEHHKHQWYAQQ 426
           T C K +++     +    + +E+ K QW A Q
Sbjct: 70  TNCEKCSEKQRSGAIKVINYVIENRKEQWDALQ 102


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 524 TRCSKPAQRVEQHQLYFDQFSVEHHKHQWYAQQ 426
           T C K +++     +    + +E+ K QW A Q
Sbjct: 70  TNCEKCSEKQRSGAIKVINYVIENRKEQWDALQ 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,935
Number of Sequences: 2352
Number of extensions: 12499
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)