Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120742.seq
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    26   0.98 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.0  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   3.0  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.0  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 72  LKTSFFRNKIAFFVPVRLINWKHSKVRHSLINFGLHTKQTRSRFSQVPVMGA 227
           + T   RNKIA FV   +   +HS+VR   I+  L  ++   R + VP + A
Sbjct: 41  IPTKPLRNKIAGFVTHLMKRLRHSQVRG--ISIKLQEEERERRDNYVPDVSA 90


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -1

Query: 376 HISDILEHVNVESGGSV*DFVFKIHVQR*SHMFYYSLFRPRKEDGS 239
           H S IL    V S     D     H Q    M Y+++F P +E G+
Sbjct: 481 HASSILPSSLVSSPDGT-DLPHHTHYQLHHQMSYHNMFTPSREPGT 525


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -1

Query: 376 HISDILEHVNVESGGSV*DFVFKIHVQR*SHMFYYSLFRPRKEDGS 239
           H S IL    V S     D     H Q    M Y+++F P +E G+
Sbjct: 457 HASSILPSSLVSSPDGT-DLPHHTHYQLHHQMSYHNMFTPSREPGT 501


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 18/69 (26%), Positives = 27/69 (39%)
 Frame = +2

Query: 275 IKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDDP 454
           I H     NVD   K L G A +    LQD+   +++ S     ++      +    D P
Sbjct: 298 IYHTLNMFNVDVSKKCLFGEAWVPTAGLQDVKTALVNGSAAVGSAVPSFLNIIATDEDPP 357

Query: 455 VPNYGSKLT 481
             N  +K T
Sbjct: 358 TYNKTNKFT 366


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,699
Number of Sequences: 2352
Number of extensions: 10551
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)