Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120732.seq
(695 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10312 Cluster: Uncharacterized 42.5 kDa protein; n=12;... 92 1e-17
UniRef50_A1YRA1 Cluster: Late expression factor-10; n=2; Nucleop... 60 7e-08
UniRef50_Q9J832 Cluster: ORF105 vp1054 virion protein; n=9; Nucl... 50 4e-05
UniRef50_A0EYU2 Cluster: Vp1054; n=2; Nucleopolyhedrovirus|Rep: ... 49 1e-04
UniRef50_Q91BH6 Cluster: VP1054 virion protein; n=6; Nucleopolyh... 40 0.044
UniRef50_UPI0001553937 Cluster: PREDICTED: hypothetical protein;... 33 5.1
UniRef50_UPI000023D2CE Cluster: hypothetical protein FG07076.1; ... 33 5.1
UniRef50_Q5CSW8 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7
UniRef50_Q234N0 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7
>UniRef50_O10312 Cluster: Uncharacterized 42.5 kDa protein; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 42.5 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 378
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 VFLNEHAKLYYRHLLRN--DQAEARKTILNADDVYECVLIKPIRTEHFRSVDEAGEHNMG 429
+FL+E A+ YYR LLR D A AR+ LNA V++C+L++P +EHF+S++EAGE NM
Sbjct: 67 IFLDERARPYYRQLLRKRTDAAAARRAFLNAGQVHDCLLLEPAPSEHFKSIEEAGETNMS 126
Query: 430 VLKIIIDTVIKYIGKLADDEYILIAD 507
L+ I+ T+ ++G++A EY LI D
Sbjct: 127 TLRTILATLTSFLGRVASTEYFLIVD 152
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +2
Query: 56 MCSTKKPIKLDLCASVKLTPFKPMRPPKPMQCWIHPRRANCKVTRPRNNYSDPDNENDML 235
M KK + L+ C SVKL P +P+R K MQCW+HPRRA C+V R R+ Y D NE+ +L
Sbjct: 1 MSCAKKLVTLNPCTSVKLVPHRPIRATK-MQCWMHPRRATCRVQRLRDAYHDERNESSLL 59
Query: 236 HMTVLNTCF 262
HMTV + F
Sbjct: 60 HMTVYSDIF 68
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/31 (51%), Positives = 27/31 (87%)
Frame = +3
Query: 510 MYVDLIYSEFRAIILPQSAYIIKGDYAESDS 602
+++DL+YSEFRA++LPQ AY+++ A++DS
Sbjct: 154 LFIDLVYSEFRAVVLPQHAYVLQQACADTDS 184
>UniRef50_A1YRA1 Cluster: Late expression factor-10; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor-10 -
Maruca vitrata MNPV
Length = 78
Score = 59.7 bits (138), Expect = 7e-08
Identities = 32/62 (51%), Positives = 35/62 (56%)
Frame = +1
Query: 10 LKDXXXXXXXXXXXXXVFDQETDQVRPLCLGEINXXXXXXXXXXXXMLDTSSTSELQSNA 189
LKD VFDQE DQ+R +CLGEI+ MLDTSSTSELQSNA
Sbjct: 17 LKDNLFLIDNNYIILNVFDQEKDQIRSMCLGEIDTFQTDATAEANAMLDTSSTSELQSNA 76
Query: 190 ST 195
ST
Sbjct: 77 ST 78
>UniRef50_Q9J832 Cluster: ORF105 vp1054 virion protein; n=9;
Nucleopolyhedrovirus|Rep: ORF105 vp1054 virion protein -
Spodoptera exigua MNPV
Length = 346
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +2
Query: 77 IKLDLCASVKLTPFKPMRPPKPMQCWIHPRRANCKVTRPRNNYSDPDNENDMLHMTVLN 253
++L+ CAS KLTPF+P++ QC IH RANCKV + + +D + +N H+T+LN
Sbjct: 10 VRLNRCASEKLTPFRPIKVTS-TQCPIHLFRANCKVIKRYDAENDTNFDN---HLTILN 64
>UniRef50_A0EYU2 Cluster: Vp1054; n=2; Nucleopolyhedrovirus|Rep:
Vp1054 - Ecotropis obliqua NPV
Length = 366
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +2
Query: 56 MCSTKKPIKLDLCASVKLTPFKPMRPPKPMQCWIHPRRANCKVTRPRNN 202
M STK +K C S KLT FKP++ P C HP RANC+ + ++
Sbjct: 1 MSSTKNVVKFKQCVSEKLTVFKPLKRPPRTVCRFHPLRANCRAIKQHDD 49
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +1
Query: 226 RHVAHDRVKHVF-LNEHAKLYYRHLLRNDQAEARKTILNADDVYECVLIKPIRT-EHFRS 399
++ H+ + + F LN K YY L+ R +NADD+Y V + I + E F
Sbjct: 75 KYFYHETIINTFYLNYKKKPYYSVLISPQDIAKRGIYMNADDLYAYVHLNQIDSDEQFFG 134
Query: 400 VDEAGEHNMGVLKIIIDTVIKYIGKLADDEYILI 501
+DE GE M +L ++I ++I + + + +Y+++
Sbjct: 135 IDENGERQMQILTMVIKSIIDCLNQCS--QYVIL 166
>UniRef50_Q91BH6 Cluster: VP1054 virion protein; n=6;
Nucleopolyhedrovirus|Rep: VP1054 virion protein -
Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 352
Score = 40.3 bits (90), Expect = 0.044
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +2
Query: 62 STKKPIKLDLCASVKLTPFKPMRPPKPMQCWIHPRRANCKVTRPRNNYSDPDNENDMLHM 241
+T K + C S K FKP+ K QC IHP RANC+V + + + D + + H
Sbjct: 12 ATTTTTKYNQCVSEKSVSFKPITFRKS-QCPIHPLRANCRVIK---TFDEDDGKEIVYHF 67
Query: 242 TVLNTCF 262
T + F
Sbjct: 68 TFIEGYF 74
>UniRef50_UPI0001553937 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 126
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 275 QNCIIGTCCATIKPRREKQFSTPTTCTS 358
Q+C TCCA + P +E F PTT S
Sbjct: 17 QSCCSSTCCAPLPPAKEHGFQEPTTIQS 44
>UniRef50_UPI000023D2CE Cluster: hypothetical protein FG07076.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07076.1 - Gibberella zeae PH-1
Length = 1095
Score = 33.5 bits (73), Expect = 5.1
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 113 PFKPMRPPKPMQCWIHPRRANCKVTRPRNNYSDPDNENDMLHMTVLNTCF*TSTQNC--- 283
P + PP+P C H +R NC+ T N +S + D+L + + C TQ C
Sbjct: 336 PCTVLSPPEPCYCGKHSQRKNCRDTDYYNGWSCREPCGDLLSCS-QHEC----TQICHPG 390
Query: 284 IIGTCCATIKPR 319
+ GTC T++ +
Sbjct: 391 VCGTCEVTVEAK 402
>UniRef50_Q5CSW8 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 587
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/76 (25%), Positives = 38/76 (50%)
Frame = +1
Query: 262 LNEHAKLYYRHLLRNDQAEARKTILNADDVYECVLIKPIRTEHFRSVDEAGEHNMGVLKI 441
+NE+++ +L + E I N +VY+ + +P E+ + + +H + ++
Sbjct: 23 INENSRQIAENLRKRSILELYDLIANGSEVYDLMNFQPTSIENQKKMT---KHQILAIQY 79
Query: 442 IIDTVIKYIGKLADDE 489
+ VIK+ KL DDE
Sbjct: 80 FVPYVIKHSYKLEDDE 95
>UniRef50_Q234N0 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1073
Score = 33.1 bits (72), Expect = 6.7
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 605 FTIAFCVISFDNVRALRQNNGPKFGIN*IDIHGSAIKMYSSSASLPMYL-MTVSMMIFKT 429
F I CVI A +NN P F +N ++I K Y + L Y+ +T+ I+
Sbjct: 840 FLILICVIVIKKDIAYIKNNIPNFMLN-LNIKSRGWKSYLIMSYLKKYICITIIYAIYYN 898
Query: 428 PMLCSPASSTLLKC 387
P+ C A S C
Sbjct: 899 PLACCIAISVNFVC 912
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,248,757
Number of Sequences: 1657284
Number of extensions: 12114869
Number of successful extensions: 32224
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32199
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -