Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120732.seq
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    25   1.7  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.0  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   4.0  

>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 491 YSSSASLPMYLMTVSMMIFKTPMLCS 414
           Y  S + P Y  +V+ +++KTP+  S
Sbjct: 181 YKGSLTTPPYFESVTWLVYKTPIYVS 206


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = +2

Query: 83  LDLCASVKLTP----FKPMRPPKPMQCWIHP 163
           L+    VKLT     + P+    P+ CWIHP
Sbjct: 542 LEQIVLVKLTAAVIEWDPLTDTVPIHCWIHP 572


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 19/76 (25%), Positives = 31/76 (40%)
 Frame = +1

Query: 268 EHAKLYYRHLLRNDQAEARKTILNADDVYECVLIKPIRTEHFRSVDEAGEHNMGVLKIII 447
           EHA       +    A  R  +  A +  ECV+I  +R  H           +G L+I  
Sbjct: 676 EHAAAVAEEAVERVHAWMRHHLQLAPEKTECVMISSLRRGH-----PEIPIRVGGLEIRS 730

Query: 448 DTVIKYIGKLADDEYI 495
              I+Y+G +  D ++
Sbjct: 731 KQAIRYLGVMIHDHFL 746


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 525 LNRHTWVRYQNVLVVGQFANVLDDRIDDDL 436
           ++R+   RY ++  +     +LDD +DDD+
Sbjct: 79  IDRYACARYGSICGLATCNLLLDDELDDDI 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,259
Number of Sequences: 2352
Number of extensions: 14487
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)