Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120731.seq
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1D61A Cluster: PREDICTED: hypothetical protein;...    33   5.0  
UniRef50_Q6VZJ3 Cluster: CNPV154 variola B22R-like protein; n=3;...    33   6.6  
UniRef50_Q8I3T3 Cluster: Putative uncharacterized protein PFE087...    33   8.7  

>UniRef50_UPI0000F1D61A Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 639

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 472 SYTVSLGINFSYNFRPQIAQHKFNVASSFIDKVKIKTSTYFTSFE 338
           +Y  S+G  +SY++ PQ+ Q + +V S  ID++  +   + T  E
Sbjct: 349 NYLSSIGSAYSYSYYPQVTQERQSVLSPSIDELSSRDEMFSTDVE 393


>UniRef50_Q6VZJ3 Cluster: CNPV154 variola B22R-like protein; n=3;
           Avipoxvirus|Rep: CNPV154 variola B22R-like protein -
           Canarypox virus (CNPV)
          Length = 1928

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 88  YFRLELFENSQYLDNFCQNYSINSILIIQFKCYN 189
           YF L + E+  Y DN C N +++ ++I  F   N
Sbjct: 146 YFNLPVMEHVSYFDNGCNNVTVDEVIIYNFSVGN 179


>UniRef50_Q8I3T3 Cluster: Putative uncharacterized protein PFE0875c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE0875c - Plasmodium falciparum (isolate 3D7)
          Length = 895

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 23/70 (32%), Positives = 35/70 (50%)
 Frame = +3

Query: 189 FSFFLRVYNQK*HANVILFQFHYGVYALQSNLLNSINPHYLRIL*IVTTISKLVKYVDVL 368
           F FF   Y    H  + ++ + + +YA    LLN   P   ++  I+ T+ +  KYVD L
Sbjct: 22  FFFFFFFYILLIHKYIYIYMYIF-IYAF-IYLLNLYTPMMQKLNTIMNTLGENKKYVDYL 79

Query: 369 ILTLSIKLLA 398
           I T   +LLA
Sbjct: 80  IRTEQFELLA 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,307,618
Number of Sequences: 1657284
Number of extensions: 11545456
Number of successful extensions: 25606
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25598
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)