BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV120731.seq (689 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0370 - 22427559-22427590,22427783-22427964,22428754-224289... 28 6.1 >02_04_0370 - 22427559-22427590,22427783-22427964,22428754-22428939, 22429125-22429280,22429366-22429589,22430933-22430968, 22431390-22431539 Length = 321 Score = 28.3 bits (60), Expect = 6.1 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +3 Query: 489 RYVLTVYLFGWKEFACNNSRYSLFGYLLCFGYWAVCWDNVSDRKSV 626 RY+L ++F W N R+ G L FG V ++ RK + Sbjct: 41 RYLLDCFVFEWLVREYNGLRFKWIGRKLIFGKEKVDYEKEETRKKI 86 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,081,898 Number of Sequences: 37544 Number of extensions: 274615 Number of successful extensions: 429 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 417 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 429 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1756684372 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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