Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120726.seq
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55FI2 Cluster: Putative uncharacterized protein; n=1; ...    37   0.41 
UniRef50_A5ZUV3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.2  
UniRef50_Q54JS6 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q4Y001 Cluster: Putative uncharacterized protein; n=2; ...    33   5.0  
UniRef50_A2EL80 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_UPI00014F730C Cluster: UPI00014F730C related cluster; n...    33   8.8  

>UniRef50_Q55FI2 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1861

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 23/70 (32%), Positives = 37/70 (52%)
 Frame = +3

Query: 246  ESFITKKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRLRKTK 425
            E  + +K + Q RE  +KN KE   K   K +KQ + +EK+  +  L +  E++RL   K
Sbjct: 1141 EEEMNEKREKQLREQKLKNKKEK--KEKLKQQKQKEKEEKERKQKQLEDEAEKKRLEDQK 1198

Query: 426  INHEIKASKK 455
            I  E +  K+
Sbjct: 1199 IAEEKRKEKQ 1208


>UniRef50_A5ZUV3 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 363

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = -2

Query: 565 GCYIQLLPVLNRYLHVAV-----SLIYVVRVSLFIIMPVAVAFFDAFIS*LILVFLNLLS 401
           GCYI L P L+R L  +      SL+YV+ + +F I+P A  FF   I+ +I VF + L 
Sbjct: 140 GCYIAL-PFLSRLLQTSTNLRQYSLLYVLGIIIFFIIPTANVFFKEAIT-VIPVFRSQLD 197

Query: 400 STTSVRYPRIYFFS 359
           +     Y   Y  +
Sbjct: 198 TGLWGSYYSFYIIT 211


>UniRef50_Q54JS6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 732

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 24/63 (38%), Positives = 37/63 (58%)
 Frame = +3

Query: 255 ITKKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRLRKTKINH 434
           +T++ K Q+RED  K  +ED IKR  + +K+ K +EKK       ++ EER + K K + 
Sbjct: 64  LTEEEK-QKREDEKKKREEDRIKR--EEDKKKKDEEKK-------KLTEEREIEKKKRDE 113

Query: 435 EIK 443
           E K
Sbjct: 114 EKK 116


>UniRef50_Q4Y001 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 914

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = +2

Query: 122 KLKIFEQI*SKEMSNLIY------HEIEMAKSKYNK*DDNFS*KNCNRVIYNEKK*GAEK 283
           KL+   ++ S   SN+++       E E  K K N  D  +  +N   V+ NEK+   +K
Sbjct: 410 KLEDMRRMPSSNNSNIVFIKKNNNPEFETLKPKINHIDQAYDPQNTYNVLQNEKRCSLKK 469

Query: 284 RRQYEECE 307
            + Y +CE
Sbjct: 470 NKNYTKCE 477


>UniRef50_A2EL80 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1851

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = +3

Query: 231  EKIAIESFI---TKKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVE 401
            E+I I+  I   TKK K +R  D+ K  KE+ I+   K ++QN++ EK+ +     +V E
Sbjct: 908  EQIQIQKEIVQETKKQKEERTRDSKKQ-KEEKIENTKKEKEQNQNPEKQKVEIGQEKVTE 966

Query: 402  ERRLRKTKINHEIKASKKATATGMMMN 482
            +    K K +++I   + A+   ++ N
Sbjct: 967  KPPTDKRKPSNQIPVEQIASELPVIEN 993


>UniRef50_UPI00014F730C Cluster: UPI00014F730C related cluster; n=1;
           Gallus gallus|Rep: UPI00014F730C UniRef100 entry -
           Gallus gallus
          Length = 152

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = +3

Query: 261 KKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRLRKTKINHEI 440
           KK K +R+E   K  K    KR  K  K+ K +EKK       E  +E++ RK K   + 
Sbjct: 3   KKEKKKRKEKKRKEKKRKEKKRKEKKRKEKKRKEKKRKEKKRKEKRKEKKKRKKKRKEKK 62

Query: 441 KAS 449
           K S
Sbjct: 63  KKS 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,866,830
Number of Sequences: 1657284
Number of extensions: 7690177
Number of successful extensions: 21341
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20854
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)