Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120726.seq
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    25   3.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.0  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   9.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   9.1  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 116 HNKLKIFEQI*SKEMSNLIYHEIE-MAKSKYNK*DDNFS*KNCNRVIYNEKK*GAEKRRQ 292
           H+ L  FEQ   +++S   +H  E  A+ K N  +DNF   + +   YN +  G  K++ 
Sbjct: 34  HDNLA-FEQN-KRKISQQSHHSEEGPARRKSNLHNDNFDTSSIHSDRYNGEAGGRAKKQS 91

Query: 293 YEECERRL 316
           + E   ++
Sbjct: 92  FSEALEKI 99


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 541 VLNRYLHVAVSLIYVVRVSLFIIMPVAVAFFDAF 440
           VLN  L   V L+++  + LF+I+  A+   + F
Sbjct: 235 VLNSILRAMVPLLHIALLVLFVIIIYAIIGLELF 268


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 496 VRVSLFIIMPVAVAFFDAFIS*LILVFLNLLSSTTSVRYPRIYFF 362
           +R+S+ I++   V +   +I  LI +FLN            I+FF
Sbjct: 415 LRISVVIVVAFVVCWTPYYIMMLIFMFLNPTERFGEDLQSGIFFF 459


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 496 VRVSLFIIMPVAVAFFDAFIS*LILVFLNLLSSTTSVRYPRIYFF 362
           +R+S+ I++   V +   +I  LI +FLN            I+FF
Sbjct: 416 LRISVVIVVAFVVCWTPYYIMMLIFMFLNPTERFGEDLQSGIFFF 460


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,843
Number of Sequences: 2352
Number of extensions: 8763
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)