Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120726.seq
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46025-1|AAD03462.1|  913|Homo sapiens translation intiation fac...    31   3.9  
BC071705-1|AAH71705.1|  913|Homo sapiens eukaryotic translation ...    31   3.9  
BC001571-1|AAH01571.1|  913|Homo sapiens eukaryotic translation ...    31   3.9  
AY762099-1|AAX07826.1|  913|Homo sapiens cell migration-inducing...    31   3.9  
AK000739-1|BAA91352.1|  913|Homo sapiens protein ( Homo sapiens ...    31   3.9  
AC002544-1|AAC27426.1|  913|Homo sapiens Translation initiation ...    31   3.9  
AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    30   9.0  

>U46025-1|AAD03462.1|  913|Homo sapiens translation intiation factor
           eIF-3 p110 subunit protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 261 KKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRL--RKTKINH 434
           KK+  ++RED  K   +   KR+ + E+ N+  E + +RG +  V E+ ++  + T+I H
Sbjct: 267 KKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITH 326

Query: 435 EIKASK 452
            +   K
Sbjct: 327 AVVIKK 332


>BC071705-1|AAH71705.1|  913|Homo sapiens eukaryotic translation
           initiation factor 3, subunit C protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 261 KKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRL--RKTKINH 434
           KK+  ++RED  K   +   KR+ + E+ N+  E + +RG +  V E+ ++  + T+I H
Sbjct: 267 KKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITH 326

Query: 435 EIKASK 452
            +   K
Sbjct: 327 AVVIKK 332


>BC001571-1|AAH01571.1|  913|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 8, 110kDa protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 261 KKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRL--RKTKINH 434
           KK+  ++RED  K   +   KR+ + E+ N+  E + +RG +  V E+ ++  + T+I H
Sbjct: 267 KKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITH 326

Query: 435 EIKASK 452
            +   K
Sbjct: 327 AVVIKK 332


>AY762099-1|AAX07826.1|  913|Homo sapiens cell migration-inducing
           protein 17 protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 261 KKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRL--RKTKINH 434
           KK+  ++RED  K   +   KR+ + E+ N+  E + +RG +  V E+ ++  + T+I H
Sbjct: 267 KKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITH 326

Query: 435 EIKASK 452
            +   K
Sbjct: 327 AVVIKK 332


>AK000739-1|BAA91352.1|  913|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20732 fis, clone HEP08682. ).
          Length = 913

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 261 KKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRL--RKTKINH 434
           KK+  ++RED  K   +   KR+ + E+ N+  E + +RG +  V E+ ++  + T+I H
Sbjct: 267 KKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITH 326

Query: 435 EIKASK 452
            +   K
Sbjct: 327 AVVIKK 332


>AC002544-1|AAC27426.1|  913|Homo sapiens Translation initiation
           factor eIF-p110 protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 261 KKSKGQRREDNMKNVKED*IKRM*KPEKQNKSQEKK*IRGYLTEVVEERRL--RKTKINH 434
           KK+  ++RED  K   +   KR+ + E+ N+  E + +RG +  V E+ ++  + T+I H
Sbjct: 267 KKAAEKKREDKAKKKHDRKSKRLDEEEEDNEGGEWERVRGGVPLVKEKPKMFAKGTEITH 326

Query: 435 EIKASK 452
            +   K
Sbjct: 327 AVVIKK 332


>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 23/76 (30%), Positives = 38/76 (50%)
 Frame = +1

Query: 232 KKLQSSHL*RKKVRGREEKTI*RM*KKTELRECKNQKSKINPKRKNKFGDI*LK*SKKED 411
           KK +     +KK + +++K   +  KK + ++ K +K K   K+KNK      K  KK+ 
Sbjct: 21  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 80

Query: 412 *GRLKLIMK*KHRKRQ 459
             + K   K K RKR+
Sbjct: 81  KRKKKKKKKKKRRKRR 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,315,603
Number of Sequences: 237096
Number of extensions: 1089941
Number of successful extensions: 6298
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6240
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)