Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120725.seq
         (688 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Cion...    34   3.7  
UniRef50_Q7Y3E9 Cluster: Putative uncharacterized protein orf13;...    33   4.9  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    33   4.9  
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   4.9  
UniRef50_Q9RZB8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  

>UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Ciona
           intestinalis|Rep: Ets transcription factor Elf - Ciona
           intestinalis (Transparent sea squirt)
          Length = 598

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 33  NALLLHGRNKQGGGTYPRGLTRGPTTSNYANYNFAGLIFITRCYSFTVEVNREHLLSTYF 212
           +A +L  RN+ G  TY R   +    S   +YN +G  ++  C     E N+ H+ ST+ 
Sbjct: 399 SAKILFARNQSGLITYDRAQLKNSRCSVSVSYNRSGYQYMVDCRR---ENNKVHISSTWV 455

Query: 213 IRKIGTRLRD 242
             K+   L D
Sbjct: 456 PEKVSQELLD 465


>UniRef50_Q7Y3E9 Cluster: Putative uncharacterized protein orf13;
           n=1; Streptococcus phage C1|Rep: Putative
           uncharacterized protein orf13 - Streptococcus phage C1
          Length = 430

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = -3

Query: 314 FQTRFSN*RMVTISFHFIVLDDYAIPQAGTNFSNEICTQQMFTIDFHGEGIT 159
           +Q+     R VT  F F++LD + +   GT +  ++     F +D + EG+T
Sbjct: 266 YQSHTFQVRGVTKRFEFLLLDIWHMTFRGTGWPEQVADMYYFMLDIYAEGVT 317


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 71  WYLSARTHKRSYHQ 112
           WYL ARTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 24  SNRNALLLHGRNKQGGGTYPRGLTRGPTTSNYANYNF 134
           + RNALL+HG N  G  TY RGL    +   Y  + F
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGLAGHLSREGYRVFCF 148


>UniRef50_Q9RZB8 Cluster: Putative uncharacterized protein; n=1;
           Deinococcus radiodurans|Rep: Putative uncharacterized
           protein - Deinococcus radiodurans
          Length = 405

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +3

Query: 435 IQYIIYLSMLFYIVKP--LIAMSNVILFRIERIL-VQFIT*VFICNVFLI 575
           + Y++Y ++ FYI KP  L  M NV   R + I  V  I  + +CN++LI
Sbjct: 49  VVYVVYYTVWFYIRKPSKLSNMRNVGFSRAQEIFGVGMIIGISVCNIWLI 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,194,945
Number of Sequences: 1657284
Number of extensions: 13344347
Number of successful extensions: 27249
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27242
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)