Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120722.seq
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11138 Cluster: Trans-activating transcriptional regula... 190 3e-47
UniRef50_P41716 Cluster: Trans-activating transcriptional regula... 108 1e-22
UniRef50_Q0N491 Cluster: IE-1; n=1; Clanis bilineata nucleopolyh... 68 2e-10
UniRef50_O36454 Cluster: Immediate early 1 protein; n=1; Lymantr... 61 2e-08
UniRef50_Q71A50 Cluster: IE-1; n=3; Nucleopolyhedrovirus|Rep: IE... 61 3e-08
UniRef50_A0EYQ9 Cluster: Immediately early 1; n=1; Ecotropis obl... 56 6e-07
UniRef50_Q91BY6 Cluster: Ie-1; n=4; Nucleopolyhedrovirus|Rep: Ie... 56 8e-07
UniRef50_Q287C6 Cluster: IE-1; n=1; Agrotis segetum nucleopolyhe... 56 1e-06
UniRef50_Q80LS7 Cluster: IE-1; n=1; Adoxophyes honmai NPV|Rep: I... 53 7e-06
UniRef50_Q9J811 Cluster: ORF132 ie1; n=2; Nucleopolyhedrovirus|R... 48 2e-04
UniRef50_Q462F7 Cluster: Orf10a ie0; n=4; Nucleopolyhedrovirus|R... 41 0.032
UniRef50_Q0ILA3 Cluster: Ie-1; n=1; Leucania separata nuclear po... 41 0.032
UniRef50_A7RIX4 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.032
UniRef50_Q54G09 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q0UGA1 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_A0CM37 Cluster: Chromosome undetermined scaffold_21, wh... 34 3.7
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q54GY7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_A5FLN4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A0DLQ1 Cluster: Chromosome undetermined scaffold_556, w... 33 8.6
UniRef50_A0B7N2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_P14248 Cluster: DNA-directed RNA polymerase II subunit ... 33 8.6
>UniRef50_P11138 Cluster: Trans-activating transcriptional
regulatory protein; n=11; Nucleopolyhedrovirus|Rep:
Trans-activating transcriptional regulatory protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 582
Score = 190 bits (463), Expect = 3e-47
Identities = 86/96 (89%), Positives = 87/96 (90%)
Frame = +1
Query: 1 TNNYYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDVH 180
TNNYYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDVH
Sbjct: 252 TNNYYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDVH 311
Query: 181 HTFKAALTSYFNLDMYYAQTTFVTFYNRWAKESVGF 288
HTFKAALTSYFNLDMYYAQTTFVT + GF
Sbjct: 312 HTFKAALTSYFNLDMYYAQTTFVTLLQSLGERKCGF 347
Score = 178 bits (433), Expect = 1e-43
Identities = 86/100 (86%), Positives = 93/100 (93%), Gaps = 2/100 (2%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS 434
LQSLGERKCGFLL KLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS
Sbjct: 337 LQSLGERKCGFLLSKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS 396
Query: 435 ESVKFPDNPPNKYVVDNLNLIVNKK--VRSRTNTVVSLIF 548
ESV+FPDNPPNKYVVDNLNLIVNKK + + ++V +L+F
Sbjct: 397 ESVQFPDNPPNKYVVDNLNLIVNKKSTLTYKYSSVANLLF 436
Score = 130 bits (313), Expect = 4e-29
Identities = 60/61 (98%), Positives = 61/61 (100%)
Frame = +2
Query: 503 QKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYLTQNVDNVK 682
+KSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYLTQNVDNVK
Sbjct: 420 KKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYLTQNVDNVK 479
Query: 683 G 685
G
Sbjct: 480 G 480
>UniRef50_P41716 Cluster: Trans-activating transcriptional
regulatory protein; n=11; Nucleopolyhedrovirus|Rep:
Trans-activating transcriptional regulatory protein -
Choristoneura fumiferana nuclear polyhedrosis virus
(CfMNPV)
Length = 560
Score = 108 bits (259), Expect = 1e-22
Identities = 47/95 (49%), Positives = 66/95 (69%)
Frame = +1
Query: 1 TNNYYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDVH 180
TNNYYMVDNRVFVV+ + ++FM+SY LV+E GI+IP ++C+D A +N C+F V
Sbjct: 234 TNNYYMVDNRVFVVSLNNVKFMVSYKLVREQGIDIPPHVNLCDDAQAERNPYDCYFEPVK 293
Query: 181 HTFKAALTSYFNLDMYYAQTTFVTFYNRWAKESVG 285
+ F+ L ++F+LDMYY+QTTFVT + G
Sbjct: 294 NVFQTTLINHFHLDMYYSQTTFVTLMQSMGESKSG 328
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/100 (48%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS 434
+QS+GE K G LL KLY+M+QD++LFTLPIMLSRKE T + + S YV+QI+KYS
Sbjct: 319 MQSMGESKSGMLLNKLYQMFQDRSLFTLPIMLSRKEPTIENTPLSRNYTSSYVAQIIKYS 378
Query: 435 ESVKFPDNPPNKYVVDNLNLIVNKK--VRSRTNTVVSLIF 548
++V+FP+N P+ V+ L IV +K + + ++V +L+F
Sbjct: 379 KNVRFPENNPDNGVISRLEEIVTQKSSLTYKYSSVANLLF 418
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2
Query: 503 QKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYLTQN 667
QKS+LTYKYSSVANLLF+ Y + +NNA++LKKVKKEDG+ +VEQY++QN
Sbjct: 402 QKSSLTYKYSSVANLLFSRYGHQ----RDNNADSLKKVKKEDGNRLLVEQYMSQN 452
>UniRef50_Q0N491 Cluster: IE-1; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: IE-1 - Clanis bilineata
nucleopolyhedrosis virus
Length = 722
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 NNYYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDV-H 180
+ Y +D RVFV++FDK R+MISY+LVK IEIP S+D+ N+ + KC+F +V
Sbjct: 372 SKYSHIDKRVFVLSFDKFRYMISYDLVKHMNIEIPESEDIKNN---GNDEGKCYFSNVKD 428
Query: 181 HTFKAALTSYFNLDMYYAQTTFV 249
+ F AL N+D +Y++ +
Sbjct: 429 YYFINALVGRLNIDFFYSRAKII 451
Score = 48.4 bits (110), Expect = 2e-04
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRK--------ESNEIETASNNFFVSPY 410
L SLGE K ++L ++ M D +L+TLP +RK E N ++ A V Y
Sbjct: 454 LASLGEAKSMYILSQIQGMVHDASLYTLPFAFNRKDAMLMVDLEPNSVDGALPKPPVCTY 513
Query: 411 VSQILKYSESVKFPDNPPNKYVVDNLNLIVNK 506
V I+KY+ ++KF N P+ D+ NL VNK
Sbjct: 514 VQDIIKYTSALKFRKNIPDDKCNDS-NL-VNK 543
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 503 QKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDG-SMHIVEQYLTQNVDN 676
+ S TYKYSSVA +L++ + +A++L K+KK + + ++++QYL ++ N
Sbjct: 565 RNSYFTYKYSSVARMLYD--------INRGDAKHLLKIKKNNSCTTNLIKQYLNDSLSN 615
>UniRef50_O36454 Cluster: Immediate early 1 protein; n=1; Lymantria
dispar MNPV|Rep: Immediate early 1 protein - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 566
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Frame = +1
Query: 7 NYYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETA-----AQNCKKCHFV 171
NY VDN+V V++ DK RFMISY L+K+ I IP S+D+ A A KC+F
Sbjct: 212 NYRHVDNKVMVLSIDKCRFMISYKLLKKMNIPIPPSEDIERQAAAEAAEEAAREDKCYFN 271
Query: 172 DV-HHTFKAALTSYFNLDMYYAQTTFVTFYNRWAKESVGFFW 294
++ F L + FNLDM Y + + W
Sbjct: 272 EIKDFEFLTLLINTFNLDMCYTRVKIFMLLSSMGDSKSKMLW 313
>UniRef50_Q71A50 Cluster: IE-1; n=3; Nucleopolyhedrovirus|Rep: IE-1
- Mamestra configurata NPV-A
Length = 607
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 22 DNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDV-HHTFKAA 198
D VFVVT+++ RFM+SY L+ I+IP + N K+C+F +V + F
Sbjct: 266 DRFVFVVTYERYRFMVSYKLLLHLEIDIPQQDQFSETQLKNTNPKECYFEEVKNFEFLTF 325
Query: 199 LTSYFNLDMYYAQ 237
LT+YF+LD YAQ
Sbjct: 326 LTNYFHLDKVYAQ 338
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS 434
L S+GE K + L EM DK+LF LP + +KE + E + + S YVS I+K +
Sbjct: 345 LASIGEYKARLIYNTLTEMINDKSLFRLPFHMCKKEITDDE--MSRAYSSAYVSDIIKLT 402
Query: 435 ESVKF 449
E++KF
Sbjct: 403 ENIKF 407
Score = 40.7 bits (91), Expect = 0.032
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +2
Query: 503 QKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYLT 661
+K+ TYK+ SV +L++ A++ N L K+KKE+GS+ ++E+YL+
Sbjct: 446 EKNNFTYKFGSVVRVLYD--------ATDKNVSKLFKIKKENGSVKLIEEYLS 490
>UniRef50_A0EYQ9 Cluster: Immediately early 1; n=1; Ecotropis
obliqua NPV|Rep: Immediately early 1 - Ecotropis obliqua
NPV
Length = 721
Score = 56.4 bits (130), Expect = 6e-07
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 YYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDV-HHT 186
Y +DN V VV++++ RFMISY+L+KE I +P ++D + + K CHF +V
Sbjct: 381 YSKIDNLVMVVSYNRYRFMISYDLLKEMKIAVPVTEDFSKIDLNRK--KNCHFNEVKDFE 438
Query: 187 FKAALTSYFNLDMYYAQ 237
F LT+ F+LDM + +
Sbjct: 439 FYNLLTNTFHLDMIFVR 455
Score = 50.4 bits (115), Expect = 4e-05
Identities = 33/97 (34%), Positives = 53/97 (54%)
Frame = +3
Query: 228 LRANHICDFLQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSP 407
+RAN I L +GERK +L + EM ++K L+TLP+ RKE+ + + VSP
Sbjct: 454 VRAN-IFLMLSLMGERKGDMILKTINEMNENKLLYTLPVNFCRKEACVEDVV---YDVSP 509
Query: 408 YVSQILKYSESVKFPDNPPNKYVVDNLNLIVNKKVRS 518
YV ++K+S ++F N++ N IV+ V +
Sbjct: 510 YVENVIKHSLGMQFKKMTNNEFDDSNRENIVSSVVNN 546
>UniRef50_Q91BY6 Cluster: Ie-1; n=4; Nucleopolyhedrovirus|Rep: Ie-1
- Helicoverpa armigera NPV
Length = 661
Score = 56.0 bits (129), Expect = 8e-07
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 YYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDV-HHT 186
YY VD V VVTF++ RFMIS+ L+ + + IP S+ KCHF ++ +
Sbjct: 325 YYNVDKLVHVVTFNRYRFMISHRLLTKLNVHIPESEQF-PMRVHQDASTKCHFNEIKDYV 383
Query: 187 FKAALTSYFNLDMYYAQT 240
F L FNLDM QT
Sbjct: 384 FMNELNHMFNLDMVMVQT 401
Score = 40.3 bits (90), Expect = 0.043
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS 434
+ ++G K L+ + E D +LF LPI LSR+ES + VS YV I+ S
Sbjct: 407 MSAIGPDKGKVLIKSVMEHINDDHLFVLPINLSRQESKLEDIQRTVASVSLYVQNIVSLS 466
Query: 435 ESVKFPDNPPN 467
+ V+F N
Sbjct: 467 KDVQFKQTAEN 477
>UniRef50_Q287C6 Cluster: IE-1; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: IE-1 - Agrotis segetum nuclear
polyhedrosis virus (AsNPV)
Length = 661
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 22 DNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDV-HHTFKAA 198
D V VVTF++ RF+ISY+L+ + GI+IP + + N C+F +V F
Sbjct: 324 DRFVLVVTFERYRFLISYHLLLDLGIDIPIQDQFSEKKLSDGNKSMCYFEEVKDFEFLTL 383
Query: 199 LTSYFNLDMYYAQ 237
LT++F+LD Y Q
Sbjct: 384 LTNFFHLDKVYVQ 396
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS 434
L S+GE+K + L EM DK+LFTLP + +KE+N E A + +S YV I+K +
Sbjct: 403 LASIGEQKTQLIYNNLSEMIVDKSLFTLPFHMCKKEANPEELA--KYDMSLYVEDIIKAT 460
Query: 435 ESVKF 449
+ ++F
Sbjct: 461 KGLRF 465
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 503 QKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYL 658
+K+ TYKY +A +N ++ L K+KKE+GS ++E YL
Sbjct: 503 EKNNFTYKYGCIARQFYN--------CADKGVNKLFKIKKENGSCRLIENYL 546
>UniRef50_Q80LS7 Cluster: IE-1; n=1; Adoxophyes honmai NPV|Rep: IE-1
- Adoxophyes honmai nucleopolyhedrovirus
Length = 642
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 10 YYMVDNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDV-HHT 186
Y +DN V V++ RF+ISY+L+K+ I IP S+D + ++ + F ++ +
Sbjct: 313 YKSIDNYVMVLSMSNHRFLISYDLIKKKNINIPKSEDFTPAQLKDKS-NQVKFSEIKNFY 371
Query: 187 FKAALTSYFNLDMYYAQTT 243
F A L + F+LDM Y QTT
Sbjct: 372 FMADLVNAFHLDMCYGQTT 390
>UniRef50_Q9J811 Cluster: ORF132 ie1; n=2; Nucleopolyhedrovirus|Rep:
ORF132 ie1 - Spodoptera exigua MNPV
Length = 714
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 22 DNRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDV-HHTFKAA 198
D V VVT ++ RFMISYNL+ IEIP + + N C F +V F +
Sbjct: 368 DRFVLVVTIERYRFMISYNLLLGMNIEIPTQDQFSEKQLSDTNKNMCIFEEVKDFKFLSL 427
Query: 199 LTSYFNLDMYYAQ 237
L + F LD Y Q
Sbjct: 428 LINTFRLDQVYIQ 440
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSRKESNEIETASNNFFVSPYVSQILKYS 434
L S+GE K + +L +M +FTLP+ +++KE+ + + +S YV I+KY+
Sbjct: 447 LASVGESKSRVIFDQLTQMMDTGMMFTLPMSVTKKEAPN-QDELKKYDMSMYVEDIMKYT 505
Query: 435 ESVKF 449
+ F
Sbjct: 506 TGLHF 510
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 503 QKSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYL 658
+KS TYKY +A +++D ++ + L KVKKE+GS ++E YL
Sbjct: 552 EKSNFTYKYGCIAR------QFYD--PTHKGVKKLFKVKKENGSTKLIENYL 595
>UniRef50_Q462F7 Cluster: Orf10a ie0; n=4; Nucleopolyhedrovirus|Rep:
Orf10a ie0 - Trichoplusia ni SNPV
Length = 806
Score = 40.7 bits (91), Expect = 0.032
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +3
Query: 255 LQSLGERKCGFLLGKLYEMYQDKNLFTLPIMLSR----KESNEIETASNNFFV-SPYVSQ 419
L S+GE + L + M +DK+LFT+P+ LSR +E+ + + NN V S Y+
Sbjct: 543 LSSIGENRAKILNQHITAMIEDKSLFTIPLHLSRSKELEETVDDDLNPNNTNVSSAYIRD 602
Query: 420 ILKYSESVKF 449
I++ S +KF
Sbjct: 603 IIELSNKLKF 612
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 518 TYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYL 658
TYK++SVA +LF+ ++++ L KVKKE GS+ ++E YL
Sbjct: 657 TYKFTSVARVLFDE--------TDSDVNKLFKVKKEPGSVAMIEDYL 695
>UniRef50_Q0ILA3 Cluster: Ie-1; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Ie-1 - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 927
Score = 40.7 bits (91), Expect = 0.032
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +3
Query: 252 FLQSLGERKCG-FLLGKLYEMYQDKNLFTLPIMLSRKESNEIE---TASNNFFVSPYVSQ 419
FL S +R G ++ KL + +D LFTLP+ +SRK+ + E A N S YV+
Sbjct: 614 FLYSAMDRNKGKYVHAKLTSLVEDNTLFTLPVNVSRKDGADTEETVQAMANNQQSKYVTD 673
Query: 420 ILKYSESVKF 449
I+ ++++V+F
Sbjct: 674 IVFHAQTVRF 683
Score = 37.9 bits (84), Expect = 0.23
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 25 NRVFVVTFDKIRFMISYNLVKETGIEIPHSQDVCNDETAAQNCKKCHFVDVHHT-FKAAL 201
N V VVT ++ +F+I L+ I +P ++ V D+ +N + F+D+ F + L
Sbjct: 542 NTVVVVTLNRYKFLIVERLLDSMNIAVPLAERV--DDGPKEN--QVSFIDIKDVKFSSLL 597
Query: 202 TSYFNLDMYYAQTTFVTFYNRWAKESVGFFWASCT 306
F+LD AQT + Y+ + + A T
Sbjct: 598 VKRFDLDTVIAQTELMFLYSAMDRNKGKYVHAKLT 632
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 506 KSTLTYKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVEQYLTQNVDN 676
K LTYKY SVA + + S + + LK+V+KE G +VE YL N D+
Sbjct: 727 KRDLTYKYGSVARVFY----------SARDTDLLKQVRKEKGGRFLVENYLECNRDD 773
>UniRef50_A7RIX4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1429
Score = 40.7 bits (91), Expect = 0.032
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 521 YKYSSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGSMHIVE 649
Y++ S A+LL+ KYHD+ NA+ LKK K +DGS+ IV+
Sbjct: 171 YQHYS-ASLLYTQDKYHDSQKQRGNAKKLKKKKMKDGSLKIVK 212
>UniRef50_Q54G09 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 233
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 303 YEMYQDKNLFTLPIMLSRKE---SNEIETASNNFFVSPYVSQILKYSESVKFPDNPPNKY 473
YE +K+LF I +++ +N I SNN + P VS I K+S S P++P +
Sbjct: 42 YENNNNKSLFNTSIGINKNNKLNNNNISLFSNNSIL-PIVSNIRKFSSSSNLPNSPKQEK 100
Query: 474 VVDNLNLIVNKKVRSRTN 527
+ N N+K + N
Sbjct: 101 DNEKDNEKKNEKENKKDN 118
>UniRef50_Q0UGA1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 316
Score = 34.7 bits (76), Expect = 2.1
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 330 FTLP-IMLSRKESNEIETASNNFFVSPYVSQILKYSESVKFPDNPPNKYVVDNLNLIVNK 506
FT P I LSRKE +++ A N+ SP +Q S K P+NPP KY + +
Sbjct: 45 FTTPTIPLSRKEKRQLKKAKNDCADSPPATQ------SSKPPNNPPKKYQLSTPASM--P 96
Query: 507 KVRSRTNTVVSLIFCLI 557
+S T L+ C I
Sbjct: 97 PAKSAIQTAYPLLVCSI 113
>UniRef50_A0CM37 Cluster: Chromosome undetermined scaffold_21, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_21,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 342
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = -1
Query: 331 NKFLS*YISYNLPKRNPHFLSPNDCKKSQMWFARNTYLN*NMKSEQL*TCDAHRQNGIFY 152
NK+L N+ +++P F+ CKK+ ++ +T LN K E C +
Sbjct: 182 NKYLISADKENIERKSPQFVGQVSCKKNNQYYFYDTGLNPKRKKEPYRQCLGELRICAIP 241
Query: 151 NFVQPSRRCTHLENE 107
+P ++C +N+
Sbjct: 242 KANEPRQQCFKFQND 256
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 539 ANLLFNNYKYHDNIASNNNAENLKKVKKEDGSM--HIVEQYLTQNVDNVK 682
+ ++ N DNI + N +N+KK KK+ G M I+E+Y +N NVK
Sbjct: 809 SEIMKTNVPTDDNINNEENLKNMKK-KKKKGVMFSDILEEYCEENNSNVK 857
>UniRef50_Q54GY7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 4590
Score = 33.5 bits (73), Expect = 4.9
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +3
Query: 216 FRYVLRANHICDFLQSLGERKCGF-LLGKLYEMYQDKNLF-TLPIMLSRKESNEIETASN 389
FRY LR F+ + G L G Y +Y + + T+ +L +KE + +N
Sbjct: 87 FRYWLRKTRQSQFVHDQSPSRIGIELSGMEYLVYNNSYKYDTIQEILKKKEQQQQSKNNN 146
Query: 390 NFFVSPYVSQILKYSESVKFPDNPPNKYVVDNLNLIVNKKVRSRTN 527
N + + + ++ + N PNK ++LN I+N ++ S+ +
Sbjct: 147 NNNTNNNNNTNINLNDIL----NDPNKTSANDLNNIINNELNSKNS 188
>UniRef50_A5FLN4 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 179
Score = 32.7 bits (71), Expect = 8.6
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 79 LVKETGIEIPHSQDVCNDETAAQNCKKCHFVDVHHTFKAALTSYFNLDMYYAQTTFVTF- 255
+V ET ++ + QDV + + N + VD + ALTSY+ LD YY+Q F
Sbjct: 7 IVSETAMKSENLQDVIHSNISIINLMREEGVDDELIHEDALTSYY-LDYYYSQYAEGNFS 65
Query: 256 ---YNR-WAKE 276
YN W KE
Sbjct: 66 QFVYNSGWNKE 76
>UniRef50_A0DLQ1 Cluster: Chromosome undetermined scaffold_556,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_556,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 748
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 396 FVSPYVSQILKYSESVKFPDNPPNKYVVDNLNLIVNKKVRSR 521
F + +S+ KYS+ K PP +DNLN I++K + S+
Sbjct: 701 FENGKISETRKYSQPTKILRLPPKSTELDNLNSIISKYIESQ 742
>UniRef50_A0B7N2 Cluster: Putative uncharacterized protein; n=1;
Methanosaeta thermophila PT|Rep: Putative
uncharacterized protein - Methanosaeta thermophila
(strain DSM 6194 / PT) (Methanothrixthermophila (strain
DSM 6194 / PT))
Length = 389
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2
Query: 183 VMHIDKMAFFTILCSRLVVAHILRMRNFYAGFFNQIVRNHKSN 55
+M +MAFFT+L L VA I+ M GF +I+R N
Sbjct: 14 IMRNPRMAFFTVLSVALAVAIIVVMMGLMGGFREEIMRTTIEN 56
>UniRef50_P14248 Cluster: DNA-directed RNA polymerase II subunit RPB1;
n=3; Eukaryota|Rep: DNA-directed RNA polymerase II
subunit RPB1 - Plasmodium falciparum (isolate CDC /
Honduras)
Length = 2452
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 530 SSVANLLFNNYKYHDNIASNNNAENLKKVKKEDGS 634
S V+N + NN ++N +SN N +K +KKEDG+
Sbjct: 1679 SPVSNNMHNNNNNNNNDSSNINDIKVKNIKKEDGN 1713
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,608,068
Number of Sequences: 1657284
Number of extensions: 11805857
Number of successful extensions: 41863
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 37118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41662
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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