Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120719.seq
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.4  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 151 QTPTTKSNAI*TCWRLLST 95
           QTPTT  +    CW L S+
Sbjct: 311 QTPTTVMSPTINCWSLTSS 329


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 372 HLNAALINDASCMENVNLSAYMQDCVK 452
           HL A+     SCME  +L  Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 372 HLNAALINDASCMENVNLSAYMQDCVK 452
           HL A+     SCME  +L  Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 372 HLNAALINDASCMENVNLSAYMQDCVK 452
           HL A+     SCME  +L  Y ++ ++
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQ 171


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 209 KKYPKITITSCCRCSKIR 262
           K  P   +T+C +CS+++
Sbjct: 75  KILPDALVTNCSKCSEVQ 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,933
Number of Sequences: 336
Number of extensions: 3962
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)