Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120719.seq
         (702 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.       33   0.99 
AF471259-1|AAQ05434.1|  122|Homo sapiens Ig heavy chain variable...    31   5.3  
X81788-1|CAA57387.1|  206|Homo sapiens ICT1 protein protein.           30   9.2  
BT007111-1|AAP35775.1|  206|Homo sapiens immature colon carcinom...    30   9.2  
BC015335-1|AAH15335.1|  206|Homo sapiens immature colon carcinom...    30   9.2  

>AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.
          Length = 2155

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -3

Query: 673  WMRKHVSECSTRAGRXTQSHWSIHFQSRNVTCSPNPGYSSNTSM*SDPRYAVGDQFSSCT 494
            W++ + S C T+    T + W  ++ S  VTC PN  Y S  S+   PR A     S C+
Sbjct: 1344 WLQNYASTCQTQG--ITVTGWR-NYTSCTVTCPPNSHYESCVSV-CQPRCAAIRLKSDCS 1399

Query: 493  RPSRKQYKMSASLILT-QSCM 434
                +     A  +L  +SC+
Sbjct: 1400 HYCVEGCHCDAGYVLNGKSCI 1420


>AF471259-1|AAQ05434.1|  122|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 122

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 411 ENVNLSAYMQ-DCVKISDALILYCLREGR 494
           EN   S Y+Q D +++ D  + YC REGR
Sbjct: 72  ENAMNSLYLQIDSLRVGDTAVYYCAREGR 100


>X81788-1|CAA57387.1|  206|Homo sapiens ICT1 protein protein.
          Length = 206

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 264 HKLNWKRIVASHILLKEWFKEPIKQYIDYDYVFKYKHLNAALINDAS 404
           +K+N K  V  H+   EW  EP++Q I   +  K   L   ++   S
Sbjct: 93  NKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSES 139


>BT007111-1|AAP35775.1|  206|Homo sapiens immature colon carcinoma
           transcript 1 protein.
          Length = 206

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 264 HKLNWKRIVASHILLKEWFKEPIKQYIDYDYVFKYKHLNAALINDAS 404
           +K+N K  V  H+   EW  EP++Q I   +  K   L   ++   S
Sbjct: 93  NKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSES 139


>BC015335-1|AAH15335.1|  206|Homo sapiens immature colon carcinoma
           transcript 1 protein.
          Length = 206

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 264 HKLNWKRIVASHILLKEWFKEPIKQYIDYDYVFKYKHLNAALINDAS 404
           +K+N K  V  H+   EW  EP++Q I   +  K   L   ++   S
Sbjct: 93  NKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSES 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,933,225
Number of Sequences: 237096
Number of extensions: 2175045
Number of successful extensions: 4262
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4262
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)