Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120719.seq
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82262-4|CAE17770.1|  679|Caenorhabditis elegans Hypothetical pr...    32   0.35 
AF067619-5|AAC17565.2|  317|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z49888-4|CAH60776.1|  742|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z49888-3|CAA90063.2|  759|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF043698-2|AAB97559.3|  700|Caenorhabditis elegans Hypothetical ...    28   7.4  
AC024805-6|AAK39340.1|  448|Caenorhabditis elegans Hypothetical ...    28   7.4  
U80029-2|AAB37582.1|  150|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z82262-4|CAE17770.1|  679|Caenorhabditis elegans Hypothetical
           protein C43F9.9 protein.
          Length = 679

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = -2

Query: 185 ASIKSCVKNFCSDTNDQIKCDLNLLAIVIDNGKIEIIFQSNLLR 54
           +S+ SC  +FC   +D+ +CDL + +I   N  ++  + SN ++
Sbjct: 439 SSVCSCFMSFCLYPHDRQECDLRISSIAYSNQYVKFHWHSNPIK 482


>AF067619-5|AAC17565.2|  317|Caenorhabditis elegans Hypothetical
           protein K03E5.1 protein.
          Length = 317

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -1

Query: 276 NLICVRILLHR-QHEVIVIFGYFFHVQ 199
           N+ CVR++  R QH+V+V F + FH++
Sbjct: 88  NIDCVRVIHSRPQHDVVVKFHHVFHIE 114


>Z49888-4|CAH60776.1|  742|Caenorhabditis elegans Hypothetical
           protein F47A4.3b protein.
          Length = 742

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 153 AKIFDARFYTRVWRLVGHGRNIQKLQ*PRVVGAAKYAHKLNWKRIVASHILLKEWFKE 326
           A I D    T ++R  G   NIQ+L+     GA    H+   + I +   LLK++F++
Sbjct: 285 ASIEDQGIVTGIYRQCGIQSNIQRLRAKFDSGAEPDLHEFGQRDIYSVSSLLKQYFRQ 342


>Z49888-3|CAA90063.2|  759|Caenorhabditis elegans Hypothetical
           protein F47A4.3a protein.
          Length = 759

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 153 AKIFDARFYTRVWRLVGHGRNIQKLQ*PRVVGAAKYAHKLNWKRIVASHILLKEWFKE 326
           A I D    T ++R  G   NIQ+L+     GA    H+   + I +   LLK++F++
Sbjct: 302 ASIEDQGIVTGIYRQCGIQSNIQRLRAKFDSGAEPDLHEFGQRDIYSVSSLLKQYFRQ 359


>Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical
           protein D1081.4 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 132 DLVVGV*AKIFDARFYTRVWRLVG 203
           + ++G+  +IFDA  Y  VW +VG
Sbjct: 288 NFIMGLRERIFDANIYQPVWNVVG 311


>AF043698-2|AAB97559.3|  700|Caenorhabditis elegans Hypothetical
           protein C54G6.2 protein.
          Length = 700

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 395 RCELYGKR*FVRVHARLCQDQRRAHFVLL 481
           R E+  K  F  VH R+C D+ +A FV +
Sbjct: 482 RIEVLRKDEFANVHLRICNDKIKASFVFV 510


>AC024805-6|AAK39340.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.9 protein.
          Length = 448

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = -2

Query: 260 VFCCTDNTRLL*FLDISSMSNKSPNASIKS-CVKNFC----SDTNDQIKCDLN 117
           VFC  +N ++L F DIS   ++  N  +++ C K+ C     D N  +K ++N
Sbjct: 29  VFCDPENPKILQFGDISMAHHRIQNGIVRTDCRKSRCLSKLFDMNIYLKMEVN 81


>U80029-2|AAB37582.1|  150|Caenorhabditis elegans Hypothetical
           protein T20D4.15 protein.
          Length = 150

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 555 DEYPGFGEHVTFRDWKCIDQWD 620
           DE+P   E +  R  KC D WD
Sbjct: 65  DEFPQCSEKLNARKSKCFDHWD 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,078,036
Number of Sequences: 27780
Number of extensions: 374266
Number of successful extensions: 953
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)